Protein Model on 4bqk assembly_id=2 (TEMPLATE: 4bqk assembly_id:2 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IMA1_HUMAN) B 1 (B) polymer(polypeptide(L)) [422 aa] IMPORTIN SUBUNIT ALPHA-1A :IMA1A_ORYSJ
2 b C 1 (C) polymer(polypeptide(L)) [12 aa] T-DNA BORDER ENDONUCLEASE VIRD2 :VIRD2_AGRT5 138F 142W 146N 148A 149S 150G 151T 152S 155T 181Q 184W 188N 191G 192D 228N 231W 234S 235N 238R 270D 315R 319N 321V 322T 323G 328T 354E 357W 360S 361N 364A 396E 399W 403N (identity: 100.0 %/52.3 %)
3 c I 1 (B) non-polymer(PEG) DI(HYDROXYETHYL)ETHER 341P(L) 345T 381F(P) (identity: 33.3 %/52.3 %)
4 d J 1 (B) non-polymer(PEG) DI(HYDROXYETHYL)ETHER 168I(V) 169S(K) 171L 172A(G) 208P 211A (identity: 50.0 %/52.3 %)
5 e K 1 (B) non-polymer(PEG) DI(HYDROXYETHYL)ETHER 238R 273W 277Y (identity: 100.0 %/52.3 %)
6 f L 1 (B) non-polymer(PEG) DI(HYDROXYETHYL)ETHER 471D(E) 474E 475A(N) (identity: 33.3 %/52.3 %)
7 g M 1 (B) non-polymer(PEG) DI(HYDROXYETHYL)ETHER 371Q 374V(I) 411E(D) 412Q 415Y (identity: 60.0 %/52.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4bqk_B_1 identity=52.3%
queryA        77:SVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHA: 176
                :*      *  *     ** **   ***** *  ***   *  *  * ** ** * *    *** ************* ** * * ** * *  ** *   :
4bqk_B_1       3:SLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSD: 102
SecStr          : HHHHHHHHHSS HHHHHHHHHHHHHTTTT  SHHHHHHHHHHTHHHHHHHTT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S H:    
ExpBur          :ebeebeebbebeeeeebbebbbebbeebebbeeeeebeebeebbbebbbebbebeebeebbbbbbebbbebbeeeeebbebbbeeebbeebeebbebeee:    
Contact         :                                                             b   b   b bbbbb  b            dd dd    

queryA       177:HISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAIS: 276
                :   ********* ***    ****   **  **** *      *     *** ****** ** * * *        ** * ** *  * *** * *** *:
4bqk_B_1     103:DVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSM----LRNATWTLSNFCRGK-PQPSFEQTRPALPALARLIHSNDEEVLTDACWALS: 197
SecStr          :HHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHT  TT  HHH----HHHHHHHHHHHH SS-S   HHHHTTHHHHHHHHTT   HHHHHHHHHHHH:    
ExpBur          :ebbbbbbebbbbbbeeeeebbeebbeeebbeebbebbeeebeeeb----eebbbebbbbbbeee-eebebeebeebbebbbebbebebeebbebbbebbb:    
Contact         :    b  b   b  bb               d  d                b  b  bb  b                               b  e   
Contact         :                                                             e                                      

queryA       277:YLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLT-NPKTNIQKEATWTMSNITAGRQDQIQQVVN: 375
                :** ** *  *  *   ** * ** **         ****  ****** * ***  **  **    **** * *  * *** ** ******  **** * *:
4bqk_B_1     198:YLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVIN: 297
SecStr          :HHTSSSHHHHHHHHHTT HHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHTTTHHHHHHHHHHS   HHHHHHHHHHHHHHHTS HHHHHHHHH:    
ExpBur          :bbbeeeeebbebbbeeebbebbbebbebebeebbebbbebbbbbbebeeebbeebbeeebbebbeebbeeeeeeebbebbbebbbebbebeeebbebbbe:    
Contact         :e                                     b   b bbb    b            c   c         b  b  bb  b      g  g 

queryA       376:HGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEK---------LSIMIEE: 466
                : *    **  *  * *   *** **  * ****   ** ***  * * **  **   *  *  * *    **     * *** *          * ** *:
4bqk_B_1     298:AGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENIL----KVGETDKTLAAGDVNVFSQMIDE: 393
SecStr          :TT HHHHHHHHHHS HHHHHHHHHHHHHHHHH  HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHH----HHHHHHHHHTT S  HHHHHHHH:    
ExpBur          :eebbeebbebbeebeeebeebbbebbbbbbeebeeebbeebbeeebbebbbebbebeeeebbebbbebbbbbb----ebbeebeeeeeeeebebbeebee:    
Contact         :     c              b  b   b       gg  g                                                            

queryA       467:CGGLDKIEALQNHENESVYKASLSLIEKYF: 496
                :  ** *** ** * *   *       * * :
4bqk_B_1     394:AEGLEKIENLQSHDNNEIYEKAVKILEAYW: 423
SecStr          :TTHHHHHHHGGG S HHHHHHHHHHHHHH :    
ExpBur          :bebbebbeebeeeeeeebeebbeebbeebe:    
Contact         :    f  ff                                                                                           


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