Protein Model on 3e9s assembly_id=1 (TEMPLATE: 3e9s assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(R1A_SARS2) A 1 (A) polymer(polypeptide(L)) [317 aa] Non-structural protein 3 :R1A_CVHSA
2 b B 1 (A) non-polymer(TTT) 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide 1725L 1726G 1727D 1810P 1811P 1827Y 1831Y 1832Q 1836Y 1864T (identity: 100.0 %/82.5 %)
3 c C 1 (A) non-polymer(ZN) ZINC ION 1752C 1755C 1787C 1789C 1790G (identity: 100.0 %/82.5 %)
4 d D 1 (A) non-polymer(CL) CHLORIDE ION 1690F 1696Q (identity: 100.0 %/82.5 %)
5 e E 1 (A) non-polymer(CL) CHLORIDE ION 1821F 1822T(L) 1868Y 1869K (identity: 75.0 %/82.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3e9s_A_1 identity=82.5%
queryA      1564:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG:1663
                :** ********** ***** ***************************  ****** *** ***** ******** * ***************** *** *:
3e9s_A_1       4:EVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGG: 103
SecStr          :S  EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE TTS   GGGTT EEEE   SHHHHHHHHHHH    TTHHHHHHHHHHHHTTS   EETT:    
ExpBur          :eeeebebbbbbbeeeeeeeebebeebbeeebeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbbbbbebbeebeebebeebee:    

queryA      1664:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK:1763
                :********** **   ** *** * *** **** ******** *********** **************  * ***** * ********* ***  *** :
3e9s_A_1     104:LTSIKWADNNUYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLT: 203
SecStr          :EE     TT HHHHHHHHHHHTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHTT  TTS   HHHHHHHHHTTB  TT EEEEEEE SSS EEEEEEE:    
ExpBur          :bbbbeeeeebbbbbbbbbbbbebebebebebbeebbeebeeeebbbbbbbbbbbbebebeebbebeebbeebbebbebeebebbbbbebeeeeeeeeeee:    
Contact         :                          d     d                            bbb                        c  c        

queryA      1764:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI:1863
                :*************   * ** *** **  ** ******* ********* * *  *** ** *********** *** ***** **** *** ****** :
3e9s_A_1     204:GVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV: 303
SecStr          :THHHHEEES S HHHHHH EEEE SSSSEEEEEEEEEESSEEEEE S  EEEE TTS SEEEEEESSTTSSEEEEEEESSSEEEEETTEEEEES EEEEE:    
ExpBur          :ebebbbbeebbbbeebeeebeeebeeeeebebbbbebebbbbbbbbeeeeeebeeeebebbbbbeeeeeebebbbbbeeebbbebebeeeeeeeebebbb:    
Contact         :                       c cc                   bb         ee    b   bb   b                           

queryA      1864:TDVFYKENSYTTTI:1877
                :******* ******:
3e9s_A_1     304:TDVFYKETSYTTTI: 317
SecStr          :EEEEEE S EE   :    
ExpBur          :bbbbbebeeeebee:    
Contact         :b   ee                                                                                              


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