Protein Model on 1p9u assembly_id=1
(TEMPLATE: 
1p9u
assembly_id:1
)Protein Model on 1p9u assembly_id=1
(TEMPLATE: 1p9u
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [299 aa] | putative coronavirus nsp2 (3CL-PRO) :R1AB_CVPPU | 1S 2G 4R 5K 6M 7A 8F(Q) 9P 10S 11G 14E 122P 123S(G) 124G(S) 125V 126Y 127Q(G) 128C(V) 137K 138G 139S 140F 141L(I) 166E 170G 172H 277N(G) 278G 283G(S) 284S(Y) 285A(G) 299Q (identity: 68.8 %/45.2 %) | |
| 2 | b | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [300 aa] | putative coronavirus nsp2 (3CL-PRO) :R1AB_CVPPU | |
| 3 | c | G 1 (G) | polymer(polypeptide(L)) [7 aa] | PHQ-VNSTLQ-CHLOROMETHYLKETONE INHIBITOR | 41H 52P(I) 54Y 140F 141L(I) 142N(A) 145C 163H 164H 165M(L) 166E 167L 168P(G) 187D 188R(Q) 189Q(P) 190T(S) 191A(M) 192Q (identity: 52.6 %/45.2 %) | |
| 4 | d | I 1 (A) | non-polymer(SO4) | SULFATE ION | ||
| 5 | e | J 1 (A) | non-polymer(SO4) | SULFATE ION | ||
| 6 | f | K 1 (A) | non-polymer(SO4) | SULFATE ION | ||
| 7 | g | L 1 (A) | non-polymer(SO4) | SULFATE ION | ||
| 8 | h | M 1 (A) | non-polymer(SO4) | SULFATE ION | ||
| 9 | i | N 1 (A) | non-polymer(MRD) | (4R)-2-METHYLPENTANE-2,4-DIOL | ||
| 10 | j | O 1 (B) | non-polymer(SO4) | SULFATE ION | 169T(N) 193A(L) 194A(E) 195G (identity: 25.0 %/45.2 %) | |
| 11 | k | P 1 (B) | non-polymer(SO4) | SULFATE ION | 35V(E) 37Y(I) 83Q(K) 103F 177L(F) (identity: 20.0 %/45.2 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:1p9u_B_1 identity=45.2% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:** **** *** ** * * * * ****** * * ****** *** *** * ** * * * *** ** ** :
1p9u_B_1 1:SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRV-INYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPE: 99
SecStr : TTTGGGEEEEEETTEEEEEEEETTEEEEEGGGG S TTS - HHHHHHT GGGEEEESSS EE EEEEEEETTEEEEEESS TT :
ExpBur :eebeeeeeebeebeebbbebbbeebebbbbbbeeebbbbbbbbbeeeeee-bebeebbeebeeeebebbbeeeebebeeeeeeebbbbbebeeebeeebe:
Contact :aa aaaaaaaa a k k c c c k
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
: ** * * * **** * * ** ** ****** * ***** * **** ** * * * ** ** * * ** :
1p9u_B_1 100:HKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMS: 199
SecStr : EE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BGGG SSSS B :
ExpBur :eeeeebeebeebbbbbbeebeeeeeebbbbbeebbbeeebeebbbbbbbbbeeeeebbbbbbbbbebeeebbbbbbbebebbeebebbeeeeebeebeeb:
Contact : k aaaaaaa aaaaac c cccaccja a k ccccccjjj
Contact : cc c
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
: ** * **** *** *** * * * * * * * ** * * * * ***** * ***** * ** :
1p9u_B_1 200:SDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSS--TDAFSMLAAKTGQSVEKLLDSIVR-LNKGFGGRTILSYGSLCDEFTPTEVIRQM: 296
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB --SGGGHHHHHHHS HHHHHHHHHH-HTT TT BTTBSS HHHHHTTT:
ExpBur :bebbbbbbbbbbeeeeeebbeeeebebeebbebbeeeebeebee--eeebeebeeeeebebeebbbbbbe-beeebeeeebbeeeebbbebbbebbbeeb:
Contact : aa aaa a
queryA 301:SGV: 303
: **:
1p9u_B_1 297:YGV: 299
SecStr :S :
ExpBur :eee:
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