#WARNING:no index is registered index 'YP_009725301.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 3iwm assembly_id=1

Protein Model on 3iwm assembly_id=1 (TEMPLATE: 3iwm assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description c(query A)
1 a A 1 (A) polymer(polypeptide(L)) [301 aa] 3C-like proteinase :R1A_CVHSA 1S 2G 4R 5K 6M 7A 9P 10S 11G 14E 122P 123S 124G 125V 126Y 127Q 128C 137K 138G 139S 140F 166E 172H (identity: 100.0 %/96.0 %)
2 b A 2 (A) polymer(polypeptide(L)) [301 aa] 3C-like proteinase :R1A_CVHSA 285A(T) 286L(I) (identity: 0.0 %/96.0 %)
3 c A(queryA) B 1 (B) polymer(polypeptide(L)) [301 aa] 3C-like proteinase :R1A_CVHSA
4 d B 2 (B) polymer(polypeptide(L)) [301 aa] 3C-like proteinase :R1A_CVHSA
5 e C 1 (C) polymer(polypeptide(L)) [300 aa] 3C-like proteinase :R1A_CVHSA 4R 123S 139S 141L (identity: 100.0 %/96.0 %)
6 f C 2 (C) polymer(polypeptide(L)) [300 aa] 3C-like proteinase :R1A_CVHSA 298R 299Q 301S (identity: 100.0 %/96.0 %)
7 g D 1 (D) polymer(polypeptide(L)) [300 aa] 3C-like proteinase :R1A_CVHSA 3F 4R 5K 6M 8F 109G 110Q 111T 127Q 128C 129A 131R 132P 197D 198T 199T 200I 201T 202V(L) 203N 204V 205L 206A 207W 208L 209Y 210A 211A 212V 213I 216D 218W 219F 220L 221N 222R 223F 224T 230F 238N 239Y 240E 242L 246H 249I 250L 253L 254S 256Q 257T 259I 260A 261V 263D 264M 265C 266A 267S(A) 268L 270E 279R 280T 281I 282L 283G 286L(I) 287L 288E 289D 290E 291F 292T 293P 295D 296V 298R 299Q 300C (identity: 96.2 %/96.0 %)
8 h D 2 (D) polymer(polypeptide(L)) [300 aa] 3C-like proteinase :R1A_CVHSA
9 i E 1 (H) polymer(polypeptide(L)) [6 aa] N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
10 j E 2 (H) polymer(polypeptide(L)) [6 aa] N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
11 k F 1 (F) polymer(polypeptide(L)) [6 aa] N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE 24T 25T 26T 41H 54Y 140F 142N 143G 145C 163H 164H 165M 166E 168P 172H 187D 189Q 190T 192Q (identity: 100.0 %/96.0 %)
12 l F 2 (F) polymer(polypeptide(L)) [6 aa] N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
13 m G 1 (G) polymer(polypeptide(L)) [6 aa] N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
14 n G 2 (G) polymer(polypeptide(L)) [6 aa] N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
15 o H 1 (E) polymer(polypeptide(L)) [6 aa] N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
16 p H 2 (E) polymer(polypeptide(L)) [6 aa] N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
ALIGNMENTS
MODEL[3] Protein A "queryA" TEMPLATE:3iwm_B_1 identity=96.0%
queryA         1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
                :********************************** ********** ****************** ******************** * ***** ******:
3iwm_B_1       1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK: 100
SecStr          :         THHHHTTEEEEESSS EEEEEEETTEEE  TTSS  SSSSSS  HHHHBSSS TTS EEEETTEEEEEEEEEE SSSEEEEESS  TT  E:    
ExpBur          :eeeeeeeeebeebeebbbebbbeeeebbbbbbeebbbbbbebbbeeeeeeebebeebbeebeeeebebbeeeeebebebeeeeebbbebebeeebeeebe:    
Contact         :aagaaaagaaa  a         kkk              k            k                                              
Contact         :   egg                                                                                              
Contact         :   g                                                                                                

queryA       101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
                :********************************* ********************************************* ********************:
3iwm_B_1     101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI: 200
SecStr          :EEE    TT  EEEEEEETTEEEEEEEE B TTS B     TT TT EEE EETTEEEE EEEEE  TTS BEEE TT  BSSS  SSSSS         :    
ExpBur          :eebeebeebeebbbbbbeebeeeeeebbebbebebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeeeee:    
Contact         :        ggg          aaaaaaag gg    aaaaekk k                 kkka k   a              k kk k    gggg
Contact         :                      e   gg          ek                         k     k                            

queryA       201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
                :* **************************************************************** *****************  **************:
3iwm_B_1     201:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 300
SecStr          :HHHHHHHHHHHHTTT  TT       HHHHHHHHHHTT     HHHHHHHHHHHHHTT  HHHHHHHHHHHHTT  SS  BTTBSS      HHHHHHH :    
ExpBur          :eeeeeeeeebbeeeeeeeeeeeeebeeeebbebbeeeeeeebeeeebeeeeeeeeeeeeebeeebbeebeebeeebeeeeeeebeeeeeeeeeeeeeeee:    
Contact         :ggggggggggggg  g ggggggg     g       ggg g   g  gg  gg gg ggg gggggg g        ggggg bbggggggg gg ffg
Contact         :                                                                                     g           gg 

queryA       301:S: 301
                :*:
3iwm_B_1     301:S: 301
SecStr          : :    
ExpBur          :e:    
Contact         :f                                                                                                   


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