Protein Model on 3tlo assembly_id=1
(TEMPLATE: 
3tlo
assembly_id:1
)Protein Model on 3tlo assembly_id=1
(TEMPLATE: 3tlo
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [302 aa] | 3C-like proteinase :R1A_CVHNL | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [302 aa] | 3C-like proteinase :R1A_CVHNL | 1S 2G 4R(K) 6M 7A 9P 10S 11G 14E 15G(R) 122P(A) 123S 124G 125V 126Y(F) 127Q(G) 137K 138G 139S 140F 141L(I) 166E 172H 284S(Y) 285A(S) 286L(S) 298R(K) 299Q 300C(M) 301S(Y) 302G (identity: 61.3 %/44.9 %) | |
| 3 | c | C 1 (A) | non-polymer(GOL) | GLYCEROL | 5K 6M 8F(Q) 111T(S) 112F 113S(N) 127Q(G) 151N 295D(E) (identity: 44.4 %/44.9 %) | |
| 4 | d | D 1 (A) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | 32L 33D(G) 94A(S) 95N 98T 101Y(H) (identity: 50.0 %/44.9 %) | |
| 5 | e | E 1 (A) | non-polymer(GOL) | GLYCEROL | 202V(D) 243T(S) 249I(C) 250L(Y) 305F(L) (identity: 0.0 %/44.9 %) | |
| 6 | f | F 1 (B) | non-polymer(GOL) | GLYCEROL | 123S (identity: 100.0 %/44.9 %) | |
| 7 | g | G 1 (B) | non-polymer(GOL) | GLYCEROL | 118Y 123S 141L(I) (identity: 66.7 %/44.9 %) | |
| 8 | h | H 1 (B) | non-polymer(GOL) | GLYCEROL | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3tlo_A_1 identity=44.9% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:** *** *** ** * * * * * *** ** * * ****** * * * *** * * * * * * ** ** * ***:
3tlo_A_1 1:SGLKKMAQPSGCVERCVVRVCYGSTVLNGVWLGDTVTCPRHVIAPSTTVL-IDYDHAYSTMRLHNFSVSHNGVFLGVVGVTMHGSVLRIKVSQSNVHTPK: 99
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG S SS - HHHHHHH GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eeeebeeeebeebeebbbebbbeeeebbbbbbeeebbbbbebbbeeeeee-bebeebeeebeeeebebbbeeeebeeeebebeebbbebebeeebeeebe:
Contact :bb bcbbcbbb bb dd dd d
Contact : c
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYD-CVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTT: 199
: * ** * **** * *** * ******** ** *** * * * * *** * ** * * * * * ** * * * :
3tlo_A_1 100:HVFKTLKPGDSFNILACYEGIASGVFGVNLRTNFTIKGSFINGACGSPGYNVRNDGTVEFCYLHQIELGSGAHVGSDFTGSVYGNFDDQPSLQVESANLM: 199
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEE TTS EEEEEEEEEE TTS EEEE TTS BGGG SSS B:
ExpBur :eeeeebeeeeebbbbbbeebeeeeeebbbbeebebbeeebeeebbbbbbbbeeeeebbbbbbbbbbebeeebbbbbbbebebbeebebbeeeeebeeeee:
Contact :d ccc g bbbbbb bbbbb c b b
Contact : f c g
Contact : g
queryA 200:ITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQ: 299
: ** * **** ** ** * ** ** * * * * ** * ** * * * *** * **** ** *:
3tlo_A_1 200:LSDNVVAFLYAALLNGCRWWLCSTRVNVDGFNEWAMANGYTSVSS--VECYSILAAKTGVSVEQLLASIQH-LHEGFGGKNILGYSSLCDEFTLAEVVKQ: 296
SecStr : HHHHHHHHHHHHHTT TT HHHHHHHHHHHTB --SGGGHHHHHHHT HHHHHHHHHH-HTT TT BTTBSS HHHHHHH:
ExpBur :bbebbbbbbbbbbeeebeebebeeebebeebbebbeeeebbebee--beebeebeeebebebeebbbbbee-beeebeeeebeeeeebbbebbbebbbee:
Contact : e e ee bbb c bb
queryA 300:CSGVTF: 305
: ** :
3tlo_A_1 297:MYGVNL: 302
SecStr :HHS :
ExpBur :eeeeee:
Contact :bbb e
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