Protein Model on 3vb6 assembly_id=1
(TEMPLATE: 
3vb6
assembly_id:1
)Protein Model on 3vb6 assembly_id=1
(TEMPLATE: 3vb6
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [301 aa] | 3C-like proteinase :R1A_CVHSA | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [306 aa] | 3C-like proteinase :R1A_CVHSA | 1S 2G 3F 4R 5K 6M 7A 8F 9P 10S 11G 14E 121S 122P 123S 124G 125V 126Y 127Q 128C 137K 138G 139S 140F 141L 166E 172H 285A(T) 286L(I) 290E 299Q 301S (identity: 93.8 %/96.0 %) | |
| 3 | c | C 1 (E) | polymer(polypeptide(L)) [4 aa] | C6Z inhibitor | 41H 49M 140F 141L 142N 143G 144S 145C 163H 164H 165M 166E 172H 187D 188R 189Q 190T 192Q (identity: 100.0 %/96.0 %) | |
| 4 | d | D 1 (F) | polymer(polypeptide(L)) [4 aa] | C6Z inhibitor | 1S (identity: 100.0 %/96.0 %) | |
| 5 | e | E 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 105R 134F(H) 183G (identity: 66.7 %/96.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3vb6_A_1 identity=96.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:********************************** ********** ****************** ******************** * ***** ******:
3vb6_A_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEEEEEEEEEGGGS TTGGGS HHHHHHT GGG EEEETTEEE EEE EETTEEEEEEEEEETT E:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebeeeeeebebebeeeeebbbebebeeebeebbe:
Contact :bbbbbbbbbbb b c c
Contact :d
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:********************************* ********************************************* ********************:
3vb6_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEEB TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SS S B :
ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeebeeb:
Contact : e bbbbbbbb e bbbbbcccc cccb b e cccc c
Contact : cc c c
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:* **************************************************************** ***************** **************:
3vb6_A_1 201:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHGGGTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHHH:
ExpBur :bbbbbbbbbbbbeeeeeebeeeeebebeebbebbeeeebeebeeeebeebeebbeebebebeebbbbbbebbeeebeeeebeebeebebbbbbebbeeeb:
Contact : bb b b
queryA 301:S: 301
:*:
3vb6_A_1 301:S: 301
SecStr : :
ExpBur :e:
Contact :b
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