Protein Model on 3vb6 assembly_id=1
(TEMPLATE: 
3vb6
assembly_id:1
)Protein Model on 3vb6 assembly_id=1
(TEMPLATE: 3vb6
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [301 aa] | 3C-like proteinase :R1A_CVHSA | 1S 2G 3F 4R 6M 7A 8F 9P 10S 11G 14E 122P 123S 124G 125V 126Y 127Q 128C 137K 138G 139S 140F 141L 166E 170G 172H 285A(T) 286L(I) 290E 299Q 302G 303V 304T 305F (identity: 94.1 %/96.1 %) | |
| 2 | b | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [306 aa] | 3C-like proteinase :R1A_CVHSA | |
| 3 | c | C 1 (E) | polymer(polypeptide(L)) [4 aa] | C6Z inhibitor | ||
| 4 | d | D 1 (F) | polymer(polypeptide(L)) [4 aa] | C6Z inhibitor | 41H 49M 140F 141L 143G 144S 145C 163H 164H 165M 166E 172H 188R 189Q 190T 192Q (identity: 100.0 %/96.1 %) | |
| 5 | e | E 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:3vb6_B_1 identity=96.1% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:********************************** ********** ****************** ******************** * ***** ******:
3vb6_B_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTGGGS HHHHHHH GGG EEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eebeeeebebeebeebbbebbbeebebbbbbbeebbbbbbbbbbeeeebeebebeeebeeeeeeebebebeeeebebeeeebeebbbebebeeebeeebe:
Contact :aaaa aaaaaa a d d
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:********************************* ********************************************* ********************:
3vb6_B_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT SSSS B :
ExpBur :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:
Contact : aaaaaaa aaaaa ddd ddda a a ddd d
Contact : dd d d
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:* **************************************************************** ***************** **************:
3vb6_B_1 201:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHGGGTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHHTTTT BTTBSS S HHHHHHHT:
ExpBur :bbbbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeeebeebeebeeeeebebeebbbbbbebbeeebeeeebbeeeebbbbbbbebbebee:
Contact : aa a a
queryA 301:SGVTFQ: 306
:******:
3vb6_B_1 301:SGVTFQ: 306
SecStr :TT :
ExpBur :eeeeee:
Contact : aaaa
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