Protein Model on 4wme assembly_id=1
(TEMPLATE: 
4wme
assembly_id:1
)Protein Model on 4wme assembly_id=1
(TEMPLATE: 4wme
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [306 aa] | MERS-CoV 3CL protease :W6A941_9BETC | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [304 aa] | MERS-CoV 3CL protease :W6A941_9BETC | 1S 2G 4R(V) 5K 6M 7A(S) 8F(H) 9P 10S 11G 14E 122P 123S(T) 124G 125V(T) 126Y(F) 137K 138G 139S 140F 141L 166E 168P(A) 169T(N) 170G 172H 214N 283G 284S 285A(T) 286L(M) 299Q 301S(M) (identity: 66.7 %/51.7 %) | |
| 3 | c | E 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 218W 219F 221N(K) 266A(Y) 270E(Q) 277N(Q) (identity: 33.3 %/51.7 %) | |
| 4 | d | F 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 215G 216D(C) 217R(A) 218W (identity: 50.0 %/51.7 %) | |
| 5 | e | G 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 131R 197D 198T(K) 199T(Y) (identity: 50.0 %/51.7 %) | |
| 6 | f | H 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 166E 167L 168P(A) 169T(N) (identity: 50.0 %/51.7 %) | |
| 7 | g | I 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 19Q 69Q 119N 120G (identity: 100.0 %/51.7 %) | |
| 8 | h | J 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 134F(Y) 182Y 183G 184P(A) (identity: 50.0 %/51.7 %) | |
| 9 | i | K 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 216D(C) 280T(Q) 281I 282L 283G (identity: 60.0 %/51.7 %) | |
| 10 | j | L 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | 5K 6M 7A(S) 125V(T) 126Y(F) (identity: 40.0 %/51.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4wme_A_1 identity=51.7% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQ---AGNVQLRVIGHSMQNCVLKLKVDTANPK: 97
:** ** *** ** ******** ******** * ***** * *** *** ** * ** *** ** ** *** ** *** :
4wme_A_1 1:SGLVKMSHPSGDVEACMVQVTCGSMTLNGLWLDNTVWCPRHVMCPADQLSDPNYDALLISMTNHSFSVQKHIGAPANLRVVGHAMQGTLLKLTVDVANPS: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGGS GGGTTS HHHHHHH GGGEEEEE SSS EE EEEEEEETTEEEEEESS TT:
ExpBur :eebeeeeeebeebeebbbebbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebeeebeeeebebebeeeeebebebebeeeeebbbebebeeebee:
Contact :bb bbbbbbbb b g gggg
Contact : jjj
queryA 98:TPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTD: 197
:** * * ** ********* * * **** ******* ** **** ***** *** * * * * ** * * * * **:
4wme_A_1 101:TPAYTFTTVKPGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSAGSVGYTKEGSVINFCYMHQMELANGTHTGSAFDGTMYGAFMDKQVHQVQLTD: 200
SecStr : EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEEEETTEEEEE TTS BGGG SSSS :
ExpBur :ebeeeeeebeebeebbbbbbeebeeeeeebbbbbbbebbebebeeebbbbbbbeeeeeebbbbbbbbbeeeeebbbbbbbebebbeebebeeeebeeeee:
Contact : gg bbbbb e h bbbbb bfbbb b hhh e
Contact : jj f ff
queryA 198:TTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNY-EPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDV: 296
: *** ****** ** ** * ** * * ** * ** * * * * **** ******* **:
4wme_A_1 201:KYCSVNVVAWLYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGTQSVDM---LAVKTGVAIEQLLYAIQQLY-TGFQGKQILGSTMLEDEFTPEDV: 296
SecStr : B HHHHHHHHHHHHHTT TT S HHHHHHHHHHHTB HHHHH---HHHHH HHHHHHHHHHHH-H TT BTTBSS HHHH:
ExpBur :eebbebbbbbbbbbbeeebeebeeeeebeeeebbeebeeeebeebeeeebbee---bbeebebbbebbbebbbebe-eebeeeebeebeebebbbbbebb:
Contact :ee bdddcc c c c c iiibbbb
Contact : i d i
queryA 297:VRQCSGVTFQ: 306
: * ** *:
4wme_A_1 297:NMQIMGVVMQ: 306
SecStr :HHHT :
ExpBur :bebbeeeeee:
Contact : b b
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