Protein Model on 4wmf assembly_id=1
(TEMPLATE: 
4wmf
assembly_id:1
)Protein Model on 4wmf assembly_id=1
(TEMPLATE: 4wmf
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | c(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [304 aa] | MERS-CoV 3CL protease :W6A941_9BETC | 210A 213I(L) 214N 299Q 300C(I) 302G 303V 304T(V) 305F(M) 306Q (identity: 60.0 %/51.0 %) | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [303 aa] | MERS-CoV 3CL protease :W6A941_9BETC | ||
| 3 | c | A(queryA) | C 1 (C) | polymer(polypeptide(L)) [289 aa] | MERS-CoV 3CL protease :W6A941_9BETC | |
| 4 | d | D 1 (A) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | ||
| 5 | e | E 1 (A) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | ||
| 6 | f | F 1 (A) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | ||
| 7 | g | G 1 (B) | non-polymer(PG4) | TETRAETHYLENE GLYCOL | ||
| 8 | h | H 1 (B) | non-polymer(PG4) | TETRAETHYLENE GLYCOL | ||
| 9 | i | I 1 (B) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | ||
| 10 | j | J 1 (B) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | ||
| 11 | k | K 1 (B) | non-polymer(PG4) | TETRAETHYLENE GLYCOL | ||
| 12 | l | L 1 (B) | non-polymer(PG4) | TETRAETHYLENE GLYCOL | ||
| 13 | m | M 1 (C) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | 101Y 102K(T) 103F (identity: 66.7 %/51.0 %) | |
| 14 | n | N 1 (C) | non-polymer(PG4) | TETRAETHYLENE GLYCOL | 35V(T) 37Y(W) 83Q 88K (identity: 50.0 %/51.0 %) | |
| ALIGNMENTS |
| MODEL[3] Protein A "queryA" TEMPLATE:4wmf_C_1 identity=51.0% |
queryA 11:GKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQ---AGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQ: 107
:* ** ******** ******** * ***** * *** *** ** * ** *** ** ** *** ** *** ** * * :
4wmf_C_1 11:GDVEACMVQVTCGSMTLNGLWLDNTVWCPRHVMCPADXXXDPNYDALLISMTNHSFSVQKHIGAPANLRVVGHAMQGTLLKLTVDVANPSTPAYTFTTVK: 110
SecStr : TTGGGEEEEEETTEEEEEEEETTEEEEEGGGGS --- HHHHHHT GGGEEEEE SSS EEE EEEEEEETTEEEEEESS TT SEEE :
ExpBur :eebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeee---ebebeebeeebeeeebebebbeeeeeebebeeeeeeebbbebebeeebeebbeeeeeebe:
Contact : n n n n mmm
queryA 108:PGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAW: 207
:** ********* * * **** ******* ** **** ***** *** * * * * ** * * * ** *** **:
4wmf_C_1 111:PGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSAGSVGYTKEGSVINFCYMHQMELAXGTHTGSAFDGTMYGAFMDKQVXXXQLTDKYCSVNVVAW: 210
SecStr :TT EEEEEEEETTEEEEEEEEEB TTS EE TT TT EEEEEETTEEEEEEEEEEE - EEEEE TTS BGGG S --- SB HHHHHHH:
ExpBur :eeeebebbbbbebeebbebebebeeeebbebbbbeebbbbbbbeeeeeebebbbbbbbeee-ebbbbbbbebebbeeeebbee---eeeeebebbbbbbb:
queryA 208:LYAAVINGDRWFLNRFTTTLNDFNLVAMKYNY-EPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ: 306
:**** ** ** * ** * * ** * ** * * * * **** ******* ** * ** *:
4wmf_C_1 211:LYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGTQSVDM---LAVKTGVAIEQLLYAIQQLY-TGFQGKQILGSTMLEDEFTPEDVNMQIMGVVMQ: 306
SecStr :HHHHHHHT TT S HHHHHHHHHTTTB HHHHH---HHHHHT HHHHHHHHHHHT-T TT BTTBSS HHHHHHHHHT :
ExpBur :bbbbbeeebeebeeeeebeeeebbeebeeebbeebeeeebbee---bbeebebbbebbbebbbebb-ebbeeeebeebbbbbeeeebeebbeeeeeeeee:
Contact : a aa aa aaaaa
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