Protein Model on 4ylu assembly_id=1
(TEMPLATE: 
4ylu
assembly_id:1
)Protein Model on 4ylu assembly_id=1
(TEMPLATE: 4ylu
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [304 aa] | ORF1a protein :A0A0A7E693_9BETC | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [302 aa] | ORF1a protein :A0A0A7E693_9BETC | 1S 2G 4R(V) 5K 6M 7A(S) 9P 10S 11G 14E 122P 123S(T) 124G 125V(T) 126Y(F) 137K 138G 139S 140F 141L 166E 169T(N) 170G 172H 214N 283G 284S 285A(T) 286L(M) 299Q 300C(I) 302G (identity: 71.9 %/52.2 %) | |
| 3 | c | E 1 (A) | non-polymer(R30) | N-{4-[(1H-benzotriazol-1-ylacetyl)(thiophen-3-ylmethyl)amino]phenyl}propanamide | 25T(M) 41H 49M(L) 54Y 140F 141L 142N(C) 145C 163H 164H(Q) 165M 166E 187D 188R(K) 189Q (identity: 66.7 %/52.2 %) | |
| 4 | d | F 1 (A) | non-polymer(ACT) | ACETATE ION | 103F 104V(T) 105R(T) 176D(A) 178E(D) (identity: 20.0 %/52.2 %) | |
| 5 | e | G 1 (A) | non-polymer(ACT) | ACETATE ION | 197D 199T(Y) (identity: 50.0 %/52.2 %) | |
| 6 | f | H 1 (B) | non-polymer(R30) | N-{4-[(1H-benzotriazol-1-ylacetyl)(thiophen-3-ylmethyl)amino]phenyl}propanamide | 1S (identity: 100.0 %/52.2 %) | |
| 7 | g | I 1 (B) | non-polymer(ACT) | ACETATE ION | ||
| 8 | h | J 1 (B) | non-polymer(ACT) | ACETATE ION | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4ylu_A_1 identity=52.2% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQ---AGNVQLRVIGHSMQNCVLKLKVDTANPK: 97
:** ** *** ** ******** ******** * ***** * *** *** ** * ** *** ** ** *** ** *** :
4ylu_A_1 1:SGLVKMSHPSGDVEACMVQVTCGSMTLNGLWLDNTVWCPRHVMCPADQLSDPNYDALLISMTNHSFSVQKHIGAPANLRVVGHAMQGTLLKLTVDVANPS: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG GGGTTS HHHHHHT GGGEEEEE SSS EEE EEEEEEETTEEEEEESS TT:
ExpBur :eebeeeeeebeebeebbbbbebeeeebbbbbbeeebbbbebbbbeeeeeeebebeebeeebeeeebebebbeeeeeebebebeeeeebbbebebeeebee:
Contact :bb bbbb bbb b c c c c
Contact :f
queryA 98:TPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTD: 197
:** * * ** ********* * * **** ******* ******* ***** *** * * * * ** * * * * **:
4ylu_A_1 101:TPAYTFTTVKPGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSCGSVGYTKEGSVINFCYMHQMELANGTHTGSAFDGTMYGAFMDKQVHQVQLTD: 200
SecStr : EEEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEEEETTEEEEE TTS BGGG SSSS :
ExpBur :ebeeeeeebeebebbbbbbbbebebeeeebbbbbbbebbeeebeeebbbbbbbeeeeeebbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeee:
Contact : ddd bbbbb bbbbbc c cccb bb b d d ccc e
Contact : cc c
queryA 198:TTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNY-EPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDV: 296
: *** ****** ** ** * ** * * ** * ** * * * * **** ******* **:
4ylu_A_1 201:KYCSVNVVAWLYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGTQSVDM---LAVKTGVAIEQLLYAIQQLY-TGFQGKQILGSTMLEDEFTPEDV: 296
SecStr : B HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHH---HHHHHT HHHHHHHHHHHT-T TT BTTBSS S HHHH:
ExpBur :eebbebbbbbbbbbbeeebeebeeeeebeeeebbebbeeeebbebeeeebbee---bbeebebbbbbbbebbbebe-eebeeeebeebeebebbbbbebb:
Contact : e b bbbb
queryA 297:VRQCSGV: 303
: * **:
4ylu_A_1 297:NMQIMGV: 303
SecStr :HHHHH :
ExpBur :bebeeee:
Contact : bb b
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