Protein Model on 4yo9 assembly_id=1
(TEMPLATE: 
4yo9
assembly_id:1
)Protein Model on 4yo9 assembly_id=1
(TEMPLATE: 4yo9
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [306 aa] | 3C-like proteinase :R1AB_BCHK4 | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [301 aa] | 3C-like proteinase :R1AB_BCHK4 | 1S 2G 4R(V) 5K 6M 7A(S) 9P 10S 11G 14E 121S(K) 122P 123S(T) 124G 125V 126Y(F) 137K 138G 139S 140F 141L 166E 169T(N) 170G 172H 214N 284S(Q) 286L(T) 298R(M) 299Q 301S(M) (identity: 67.7 %/51.0 %) | |
| 3 | c | C 1 (A) | non-polymer(ZN) | ZINC ION | 27L 41H 145C (identity: 100.0 %/51.0 %) | |
| 4 | d | D 1 (A) | non-polymer(ACT) | ACETATE ION | 197D 199T(Y) (identity: 50.0 %/51.0 %) | |
| 5 | e | E 1 (A) | non-polymer(ACT) | ACETATE ION | 118Y 139S 140F 141L (identity: 100.0 %/51.0 %) | |
| 6 | f | F 1 (A) | non-polymer(IPA) | ISOPROPYL ALCOHOL | 123S(T) (identity: 0.0 %/51.0 %) | |
| 7 | g | G 1 (A) | non-polymer(SIN) | SUCCINIC ACID | 11G 15G(N) (identity: 50.0 %/51.0 %) | |
| 8 | h | H 1 (A) | non-polymer(MPD) | (4S)-2-METHYL-2,4-PENTANEDIOL | 224T(R) 260A(S) 262L(E) (identity: 0.0 %/51.0 %) | |
| 9 | i | I 1 (B) | non-polymer(ACT) | ACETATE ION | ||
| 10 | j | J 1 (B) | non-polymer(ACT) | ACETATE ION | ||
| 11 | k | K 1 (B) | non-polymer(IPA) | ISOPROPYL ALCOHOL | ||
| 12 | l | L 1 (B) | non-polymer(IPA) | ISOPROPYL ALCOHOL | ||
| 13 | m | M 1 (B) | non-polymer(FMT) | FORMIC ACID | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4yo9_A_1 identity=51.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQ---AGNVQLRVIGHSMQNCVLKLKVDTANPK: 97
:** ** *** ** * ****** ******** * **** * *** *** * ** * ** *** *** *** ** *** :
4yo9_A_1 1:SGLVKMSAPSGAVENCIVQVTCGSMTLNGLWLDNTVWCPRHIMCPADQLTDPNYDALLISKTNHSFIVQKHIGAQANLRVVAHSMVGVLLKLTVDVANPS: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTTTSS HHHHHHT TTS EEEB SSS B EEEEEEETTEEEEEESS TT:
ExpBur :eebeeeebebeebeebbbbbbbeebebbbbbbeebbbbbbbbbbeeeeeeebebeebeeeeeeeebebebeeeeebebebeeeebeebbbebebeeebee:
Contact :bb bbbb bbb bg c c
Contact : g
queryA 98:TPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTD: 197
:** * * ** ********* * ** * * ******* ******* * *** *** * * * * ** * * ** * **:
4yo9_A_1 101:TPAYTFSTVKPGASFSVLACYNGKPTGVFTVNLRHNSTIKGSFLCGSCGSVGYTENGGVINFVYMHQMELSNGTHTGSSFDGVMYGAFEDKQTHQLQLTD: 200
SecStr : SEEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEEEETTEEEEE TTS BGGG SSSS :
ExpBur :ebeeeeeebeebebbbbbbbeebebeeeebbbbbebebbebebeeebbbbbbbeeeeeebebbbbbbbeeeeebbbbbbbebebbeebebeeeebeeeee:
Contact : e bbbbbb bbbbb c b bb b d
Contact : f eee
queryA 198:TTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNY-EPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDV: 296
: * ** ******* ** ** * * * * * ** * * * * * * **** ******* **:
4yo9_A_1 201:KYCTINVVAWLYAAVLNGCKWFVKPTRVGIVTYNEWALSNQFTEFVGTQSIDM---LAHRTGVSVEQMLAAIQS-LHAGFQGKTILGQSTLEDEFTPDDV: 296
SecStr : B HHHHHHHHHHHHHTT TT S HHHHHHHHTTTTB HHHHH---HHHHHT HHHHHHHHHH-HHH TT BTTBSS HHHH:
ExpBur :eebbbbbbbbbbbbbeeebeebeeeeebeeeebbeebeeeebbebeeeebbee---bbeeeebebebbbbbbee-beeebeeeebeeeeebbbbbbbeeb:
Contact : d b h h h b b
queryA 297:VRQCSGVTFQ: 306
: * ** *:
4yo9_A_1 297:NMQVMGVVMQ: 306
SecStr :HHHS :
ExpBur :bebbeeeeee:
Contact : bb b
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