Protein Model on 4yog assembly_id=1
(TEMPLATE: 
4yog
assembly_id:1
)Protein Model on 4yog assembly_id=1
(TEMPLATE: 4yog
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [306 aa] | 3C-like proteinase :R1AB_BCHK4 | 1S 2G 4R(V) 5K 6M 7A(S) 9P 10S 11G 14E 122P 123S(T) 124G 125V 126Y(F) 137K 138G 139S 140F 141L 166E 169T(N) 170G 172H 214N 283G 285A(S) 286L(T) 299Q 301S(M) (identity: 73.3 %/51.0 %) | |
| 2 | b | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [306 aa] | 3C-like proteinase :R1AB_BCHK4 | |
| 3 | c | C 1 (A) | non-polymer(ACT) | ACETATE ION | 12K(A) (identity: 0.0 %/51.0 %) | |
| 4 | d | D 1 (A) | non-polymer(ACT) | ACETATE ION | ||
| 5 | e | E 1 (A) | non-polymer(ACT) | ACETATE ION | ||
| 6 | f | F 1 (A) | non-polymer(ACT) | ACETATE ION | ||
| 7 | g | G 1 (A) | non-polymer(4F5) | N-[4-(acetylamino)phenyl]-2-(1H-benzotriazol-1-yl)-N-[(1R)-2-(tert-butylamino)-2-oxo-1-(thiophen-3-yl)ethyl]acetamide | 1S (identity: 100.0 %/51.0 %) | |
| 8 | h | H 1 (B) | non-polymer(ACT) | ACETATE ION | 101Y (identity: 100.0 %/51.0 %) | |
| 9 | i | I 1 (B) | non-polymer(ACT) | ACETATE ION | 11G 15G(N) (identity: 50.0 %/51.0 %) | |
| 10 | j | J 1 (B) | non-polymer(ACT) | ACETATE ION | 131R 197D 198T(K) 199T(Y) (identity: 50.0 %/51.0 %) | |
| 11 | k | K 1 (B) | non-polymer(4F5) | N-[4-(acetylamino)phenyl]-2-(1H-benzotriazol-1-yl)-N-[(1R)-2-(tert-butylamino)-2-oxo-1-(thiophen-3-yl)ethyl]acetamide | 25T(M) 41H 46S(A) 49M(L) 140F 141L 142N(C) 145C 163H 165M 166E 187D 188R(K) 189Q (identity: 64.3 %/51.0 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:4yog_B_1 identity=51.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQ---AGNVQLRVIGHSMQNCVLKLKVDTANPK: 97
:** ** *** ** * ****** ******** * **** * *** *** * ** * ** *** *** *** ** *** :
4yog_B_1 1:SGLVKMSAPSGAVENCIVQVTCGSMTLNGLWLDNTVWCPRHIMCPADQLTDPNYDALLISKTNHSFIVQKHIGAQANLRVVAHSMVGVLLKLTVDVANPS: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG SGGGSS HHHHHHH GGGEEEEE SSS EEE EEEEEEETTEEEEEESS TT:
ExpBur :eebeeeebebeebeebbbbbebeeeebbbbbbeebbbbbbbbbbeeeeeeebebeebbeeeeeeebebebeeeeeeebebeeeeebebbbebebeeebee:
Contact :aa aaaa aaac ai k k k k
Contact :g i
queryA 98:TPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTD: 197
:** * * ** ********* * ** * * ******* ******* * *** *** * * * * ** * * ** * **:
4yog_B_1 101:TPAYTFSTVKPGASFSVLACYNGKPTGVFTVNLRHNSTIKGSFLCGSCGSVGYTENGGVINFVYMHQMELSNGTHTGSSFDGVMYGAFEDKQTHQLQLTD: 200
SecStr : SEEE TT EEEEEEEETTEEEEEEEEE TTS B GGGTT EEEEESSS EEEEEEEEEEEETTEEEEE TTS BGGG SSSS :
ExpBur :ebeeeeeebeebebbbbbbbeebeeeeeebbbbbebbbbeeebeebbbbbbbbeeeeeebbbbbbbbbeeeeebbbbbbbebebbeebebeeeeeeeeee:
Contact : h aaaaa j aaaaak k k ka aa a kkk j
Contact : kk k
queryA 198:TTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNY-EPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDV: 296
: * ** ******* ** ** * * * * * ** * * * * * * **** ******* **:
4yog_B_1 201:KYCTINVVAWLYAAVLNGCKWFVKPTRVGIVTYNEWALSNQFTEFVGTQSIDM---LAHRTGVSVEQMLAAIQS-LHAGFQGKTILGQSTLEDEFTPDDV: 296
SecStr : B HHHHHHHHHHHHTTT TT S HHHHHHHHTTTTB HHHHH---HHHHH HHHHHHHHHH-HHH TT BTTBSS HHHH:
ExpBur :eebbbbbbbbbbbbbbeebeebeeeeebeeeebbeebeeeebbebeeeebbee---bbeebebbbebbbbbbee-beeebeeeebeeeeebbbbbbbeeb:
Contact :jj a a aa
queryA 297:VRQCSGVTFQ: 306
: * ** *:
4yog_B_1 297:NMQVMGVVMQ: 306
SecStr :HHTTTT :
ExpBur :bebbeeeeee:
Contact : a a
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