Protein Model on 5gwz assembly_id=1
(TEMPLATE: 
5gwz
assembly_id:1
)Protein Model on 5gwz assembly_id=1
(TEMPLATE: 5gwz
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (B) | polymer(polypeptide(L)) [299 aa] | PEDV main protease :R1A_PEDV7 | |
| 2 | b | B 1 (A) | polymer(polypeptide(L)) [299 aa] | PEDV main protease :R1A_PEDV7 | 4R 6M 7A 9P 10S 11G 14E 122P(A) 123S(A) 124G 125V 126Y 127Q(G) 128C(V) 137K(R) 138G 139S 141L(I) 280T(Q) 285A(T) 299Q 300C(M) 301S(Y) 302G (identity: 58.3 %/46.1 %) | |
| 3 | c | C 1 (D) | polymer(polypeptide(L)) [6 aa] | N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE | 25T(M) 26T(A) 27L 41H 50L(I) 140F 142N 143G 145C 163H 164H(Q) 165M(L) 166E 168P(G) 172H 187D 188R(Q) 189Q(P) 190T 191A(L) 192Q (identity: 57.1 %/46.1 %) | |
| 4 | d | D 1 (E) | polymer(polypeptide(L)) [6 aa] | N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5gwz_A_1 identity=46.1% |
queryA 2:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSE-DMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:* **** *** ** * * * * ****** * * ****** * * * *** *** * * * * ** * ***:
5gwz_A_1 7:GLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDIVMCPRHVIASSTTSTIDYDYALSVLRL--HNFSISSGNVFLGVVSATMRGALLQIKVNQNNVHTPK: 104
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG SSS HHHHHHH G--GGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :ebebeeeebeebeebbbebbbeeeebbbbbbeebbbbbbbbbbeeeeeebebeebeeebee--eebebbeeeeebeeeebeeeebbbebebeeebeeebe:
Contact : b bb bbb b ccc c c
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:* ** * **** * *** ** * ** *** ** *** * ** * *** * ** * * * ** * ** * * * * :
5gwz_A_1 105:YTYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYNINNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLF: 204
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BGGG SSSS B :
ExpBur :eeeeebebbebbbbbbbeebeeeeeebbbbbebebbeeebeeebbbbbbbeeeeebbbbbbbbbbebeeebbbbbbbebebbeebebbeeebeeeeeeeb:
Contact : bbbbbbb bbbcbcc c cccc c c cccccc
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:* **** **** *** * * ** * * * * * ** * ** * * * *** * **** **** :
5gwz_A_1 205:TENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMT--TVGNTDCFSILAAKTGVDVQRLLASIQSLHKN-FGGKQILGHTSLTDEFTTGEVVRQM: 301
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHTTTTB -- GGGHHHHHHHT HHHHHHHHHHHTT - S BTTBSS HHHHHHHH:
ExpBur :bebbbbbbbbbbeeebeebeeeeeeebeebbeebeeeebb--ebeeeeebeebeeeeebbbeebbbbbeebbee-beeeebeeeeebbbebbbebbbeee:
Contact : b b bb
queryA 301:SGV: 303
: **:
5gwz_A_1 302:YGV: 304
SecStr :H :
ExpBur :eee:
Contact :bb
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