Protein Model on 5wkj assembly_id=1
(TEMPLATE: 
5wkj
assembly_id:1
)Protein Model on 5wkj assembly_id=1
(TEMPLATE: 5wkj
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [302 aa] | Orf1a protein :A0A1L2E0X0_9BETC | 2G 4R(V) 5K 6M 7A(S) 8F(H) 9P 10S 11G 14E 122P 123S(T) 124G 125V(T) 126Y(F) 137K 138G 139S 141L 169T(N) 170G 171V(T) 283G 284S 285A(T) 286L(M) 298R(M) 299Q 302G (identity: 62.1 %/52.2 %) | |
| 2 | b | A(queryA) | A 2 (A) | polymer(polypeptide(L)) [302 aa] | Orf1a protein :A0A1L2E0X0_9BETC | |
| 3 | c | B 1 (A) | non-polymer(CA) | CALCIUM ION | ||
| 4 | d | B 2 (A) | non-polymer(CA) | CALCIUM ION | ||
| 5 | e | C 1 (A) | non-polymer(CA) | CALCIUM ION | ||
| 6 | f | C 2 (A) | non-polymer(CA) | CALCIUM ION | 98T (identity: 100.0 %/52.2 %) | |
| 7 | g | D 1 (A) | non-polymer(B1S) | (1R,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid | ||
| 8 | h | D 2 (A) | non-polymer(B1S) | (1R,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid | 41H 49M(L) 140F 141L 142N(C) 144S 145C 163H 164H(Q) 165M 166E 172H 187D 188R(K) 189Q (identity: 73.3 %/52.2 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:5wkj_A_2 identity=52.2% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQ---AGNVQLRVIGHSMQNCVLKLKVDTANPK: 97
:** ** *** ** ******** ******** * ***** * *** *** ** * ** *** ** ** *** ** *** :
5wkj_A_2 8:SGLVKMSHPSGDVEACMVQVTCGSMTLNGLWLDNTVWCPRHVMCPADQLSDPNYDALLISMTNHSFSVQKHIXXXANLRVVGHAMQGTLLKLTVDVANPS: 107
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGGS TTS SS HHHHHHH GGGEEEE --- EE EEEEEEETTEEEEEESS TT:
ExpBur :bebeeeeeebeebeebbbbbebeebebbbbbbeebbbbbbebbbeeeeeeebebeebeeebeeeebebeeee---eebebebeeeeebbbebebeeebee:
Contact : a aaaaaaaa a h h
queryA 98:TPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTD: 197
:** * * ** ********* * * **** ******* ******* ***** *** * * * * ** * * * * **:
5wkj_A_2 108:TPAYTFTTVKPGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSCGSVGYTKEGSVINFCYMHQMELANGTHTGSAFDGTMYGAFMDKQVHQVQLTD: 207
SecStr : SEEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT SSSS :
ExpBur :ebeeeeeebeebeebbbbbbbebbeeeeebbbbbbbebbeeebeeebbbbbbbeeeeeebbbbbbbbbebeeebbbbbbbebebbeebebbeeeeeeeee:
Contact :f aaaaa aaahah hh hhhh aaah hhh
Contact : h
queryA 198:TTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNY-EPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDV: 296
: *** ****** ** ** * ** * * ** * ** * * * * **** ******* **:
5wkj_A_2 208:KYCSVNVVAWLYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGTQSVDM---LAVKTGVAIEQLLYAIQQLY-TGFQGKQILGSTMLEDEFTPEDV: 303
SecStr : B HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHH---HHHHHT HHHHHHHHHHHH-H TT BTTBSS SS HHHH:
ExpBur :eebbebbbbbbbbbbeeeeeebeeeeebeeeebbeebeeeebbebeeeebbee---bbeeeebbbebbbebbbebe-eebeeeebeebeebebbbbbebb:
Contact : aaaa
queryA 297:VRQCSGV: 303
: * **:
5wkj_A_2 304:NMQIMGV: 310
SecStr :HHHHH :
ExpBur :beeeeee:
Contact : aa a
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