Protein Model on 5wkk assembly_id=1
(TEMPLATE: 
5wkk
assembly_id:1
)Protein Model on 5wkk assembly_id=1
(TEMPLATE: 5wkk
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [301 aa] | Orf1a protein :A0A1L2E0X0_9BETC | 2G 4R(V) 5K 6M 7A(S) 8F(H) 9P 10S 11G 14E 122P 123S(T) 124G 125V(T) 126Y(F) 137K 138G 139S 141L 168P(A) 169T(N) 170G 171V(T) 280T(Q) 283G 285A(T) 286L(M) 298R(M) 299Q 300C(I) 302G (identity: 54.8 %/52.2 %) | |
| 2 | b | A(queryA) | A 2 (A) | polymer(polypeptide(L)) [301 aa] | Orf1a protein :A0A1L2E0X0_9BETC | |
| 3 | c | B 1 (A) | non-polymer(PG4) | TETRAETHYLENE GLYCOL | 118Y 123S(T) (identity: 50.0 %/52.2 %) | |
| 4 | d | B 2 (A) | non-polymer(PG4) | TETRAETHYLENE GLYCOL | 6M 7A(S) 8F(H) 298R(M) (identity: 25.0 %/52.2 %) | |
| 5 | e | C 1 (A) | non-polymer(MG) | MAGNESIUM ION | ||
| 6 | f | C 2 (A) | non-polymer(MG) | MAGNESIUM ION | ||
| 7 | g | D 1 (A) | non-polymer(AW4) | (1S,2S)-2-[(N-{[2-(3-chlorophenyl)ethoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid | ||
| 8 | h | D 2 (A) | non-polymer(AW4) | (1S,2S)-2-[(N-{[2-(3-chlorophenyl)ethoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid | 41H 49M(L) 140F 141L 142N(C) 143G 144S 145C 163H 164H(Q) 165M 166E 168P(A) 172H 187D 189Q 190T(V) 191A(H) (identity: 66.7 %/52.2 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:5wkk_A_2 identity=52.2% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQ---AGNVQLRVIGHSMQNCVLKLKVDTANPK: 97
:** ** *** ** ******** ******** * ***** * *** *** ** * ** *** ** ** *** ** *** :
5wkk_A_2 8:SGLVKMSHPSGDVEACMVQVTCGXMTLNGLWLDNTVWCPRHVMCPADQLSDPNYDALLISMTNHSFSVQKHXXXXANLRVVGHAMQGTLLKLTVDVANPS: 107
SecStr : S HHHHTTEEEEEE - EEEEEEETTEEEEEGGGGS GGGTTS HHHHHHH GGGEEEE ---- EE EEEEEEETTEEEEEESS TT:
ExpBur :bebeeeeeebeebeebbbbbbbe-eebbbbbbeeebbbbbbbbbeeebeeebebeebbeebeeeebebebe----eebebeeeeeeebbbbbebeeebee:
Contact : a aaaaaaaa a h h
Contact : ddd
queryA 98:TPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTD: 197
:** * * ** ********* * * **** ******* ******* ***** *** * * * * ** * * * * **:
5wkk_A_2 108:TPAYTFTTVKPGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSCGSVGYTKEGSVINFCYMHQMELANGTHTGSAFDGTMYGAFMDKQVHQVQLTD: 207
SecStr : SEEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT SSSS :
ExpBur :ebeeeeeebeebeebbbbbbeebbeeeeebbbbbbbebbeeebeeebbbbbbbeeeeeebbbbbbbbbebeeebbbbbbbebebbeebebbeeeeeeeee:
Contact : c aaaaa aaahahhhh hhhh aaaah h hhh
Contact : c h h
queryA 198:TTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNY-EPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDV: 296
: *** ****** ** ** * ** * * ** * ** * * * * **** ******* **:
5wkk_A_2 208:KYCSVNVVAWLYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGTQSVDM---LAVKTGVAIEQLLYAIQQLY-TGFQGKQILGSTMLEDEFTPEDV: 303
SecStr : B HHHHHHHHHHHHHTT TT S HHHHHHHHHTTTB HHHHH---HHHHHT HHHHHHHHHHHH-T TT BTTBSS SS HHHH:
ExpBur :bebbebbbbbbbbbbeeebeebeeeeebeeeebbeebeeeebbebeeeebbee---bbeebebebebbbebbbebe-eebeeeebeeeeebebebbbebb:
Contact : a a aa
queryA 297:VRQCSGV: 303
: * **:
5wkk_A_2 304:NMQIMGV: 310
SecStr :HHHTT :
ExpBur :beeeeee:
Contact : aaa a
Contact : d
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