Protein Model on 6m0k assembly_id=1
(TEMPLATE: 
6m0k
assembly_id:1
)Protein Model on 6m0k assembly_id=1
(TEMPLATE: 6m0k
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [304 aa] | Replicase polyprotein 1ab :R1AB_SARS2 | |
| 2 | b | B 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 15G 17M 18V 31W 70A 71G 97K (identity: 100.0 %/100.0 %) | |
| 3 | c | C 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 165M 166E 168P 188R 189Q 190T 192Q (identity: 100.0 %/100.0 %) | |
| 4 | d | D 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 118Y 141L (identity: 100.0 %/100.0 %) | |
| 5 | e | E 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 6M 7A 8F 127Q 298R (identity: 100.0 %/100.0 %) | |
| 6 | f | F 1 (A) | non-polymer(FJC) | ~{N}-[(2~{S})-3-(3-fluorophenyl)-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]propan-2-yl]-1~{H}-indole-2-carboxamide | 41H 49M 140F 141L 142N 143G 144S 145C 163H 164H 165M 166E 172H 186V 187D 188R 189Q (identity: 100.0 %/100.0 %) | |
| 7 | g | A 2 (A) | polymer(polypeptide(L)) [304 aa] | Replicase polyprotein 1ab :R1AB_SARS2 | 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 122P 123S 124G 125V 126Y 127Q 137K 138G 139S 140F 141L 166E 172H 280T 283G 285A 286L 290E 298R 299Q 301S 303V (identity: 100.0 %/100.0 %) | |
| 8 | h | B 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 9 | i | C 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 10 | j | D 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 298R (identity: 100.0 %/100.0 %) | |
| 11 | k | E 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 123S (identity: 100.0 %/100.0 %) | |
| 12 | l | F 2 (A) | non-polymer(FJC) | ~{N}-[(2~{S})-3-(3-fluorophenyl)-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]propan-2-yl]-1~{H}-indole-2-carboxamide | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6m0k_A_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
6m0k_A_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TGGGGS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT E:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeeeeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:
Contact :gg ggeeeggg gb bb b f f bb b
Contact : ggg
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
6m0k_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEEB TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SS B :
ExpBur :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeeeeb:
Contact : d ggggge gggfdffff ffcc c f ffccc c
Contact : k g gf ff g ff
Contact : g g
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
6m0k_A_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHHT:
ExpBur :bbbbbbbbbbbbbeeeeebeeeeebeeeebbebbeeeebeebeeeebeebeebbeebebebeebbbbbbebbeeebeeeebeebeebebbbbbebbeeeb:
Contact : g g gg g eg
Contact : g
Contact : j
queryA 301:SGVT: 304
:****:
6m0k_A_1 301:SGVT: 304
SecStr :TTT :
ExpBur :eeee:
Contact :g g
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