Protein Model on 6vh2 assembly_id=1
(TEMPLATE: 
6vh2
assembly_id:1
)Protein Model on 6vh2 assembly_id=1
(TEMPLATE: 6vh2
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [299 aa] | Orf1a protein :A0A1L2E0X0_9BETC | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [302 aa] | Orf1a protein :A0A1L2E0X0_9BETC | 2G 4R(V) 5K 6M 7A(S) 8F(H) 9P 10S 11G 14E 122P 123S(T) 124G 125V(T) 126Y(F) 137K 138G 139S 141L 168P(A) 169T(N) 170G 298R(M) 299Q (identity: 62.5 %/52.2 %) | |
| 3 | c | C 1 (A) | non-polymer(QZ4) | 4,4-difluorocyclohexyl [(2S)-3-cyclohexyl-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-1-oxopropan-2-yl]carbamate | 41H 49M(L) 54Y 140F 141L 142N(C) 143G 144S 145C 163H 164H(Q) 165M 166E 172H 187D 188R(K) 189Q 190T(V) 191A(H) 192Q (identity: 70.0 %/52.2 %) | |
| 4 | d | D 1 (B) | non-polymer(QZ4) | 4,4-difluorocyclohexyl [(2S)-3-cyclohexyl-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-1-oxopropan-2-yl]carbamate | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6vh2_A_1 identity=52.2% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQ---AGNVQLRVIGHSMQNCVLKLKVDTANPK: 97
:** ** *** ** ******** ******** * ***** * *** *** ** * ** *** ** ** *** ** *** :
6vh2_A_1 8:SGLVKMSHPSGDVEACMVQVTCGSMTLNGLWLDNTVWCPRHVMCPADQLSDPNYDALLISMTNHSFSVQKHIXXXANLRVVGHAMQGTLLKLTVDVANPS: 107
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG STT SS HHHHHHT GGGEEEE --- EE EEEEEEETTEEEEEESS TT:
ExpBur :eebeeeeeebeebeebbbbbbbeebebbbbbbeeebbbbbebbbeeeeeeebebeebbeebeeeebebeeee---eebbbebeeeeebbbbbebeeebee:
Contact : b bbbbbbbb b c c c
queryA 98:TPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTD: 197
:** * * ** ********* * * **** ******* ******* ***** *** * * * * ** * * * * **:
6vh2_A_1 108:TPAYTFTTVKPGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSCGSVGYTKEGSVINFCYMHQMELANGTHTGSAFDGTMYGAFMDKQVHQVQLTD: 207
SecStr : EEE TT EEEEEEEETTEEEEEEEEE TTS B S TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BGGG SSSS :
ExpBur :ebeeeeeebeebeebbbbbbbebbeeeeeebbbbbbebbeeebeeebbbbbbbbeeeeebbbbbbbbbebeeebbbbbbbebebbeebebeeeebebeee:
Contact : bbbbb bbbcbcccc cccc bbb c cccccc
Contact : c
queryA 198:TTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNY-EPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDV: 296
: *** ****** ** ** * ** * * ** * ** * * * * **** ******* **:
6vh2_A_1 208:KYCSVNVVAWLYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGTQSVDM---LAVKTGVAIEQLLYAIQQLY-TGFQGKQILGSTMLEDEFTPEDV: 303
SecStr : B HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHH---HHHHHS HHHHHHHHHHHT-T TT BTTBSS S HHHH:
ExpBur :eebbbbbbbbbbbbbeeebeebeeeeebeeeebbeebeeeebbebeeeebbee---bbeeeebebebbbebbbebe-eebeeeebeeeeebbbebbbeeb:
queryA 297:VRQ: 299
: *:
6vh2_A_1 304:NMQ: 306
SecStr :HHH:
ExpBur :beb:
Contact : bb
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