Protein Model on 6w79 assembly_id=1
(TEMPLATE: 
6w79
assembly_id:1
)Protein Model on 6w79 assembly_id=1
(TEMPLATE: 6w79
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [306 aa] | Main protease | 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 122P 123S 124G 125V 126Y 127Q 128C 137K 138G 139S 140F 141L 166E 170G 172H 285A(T) 286L(I) 298R 299Q 300C 301S (identity: 93.8 %/96.1 %) | |
| 2 | b | A(queryA) | A 2 (A) | polymer(polypeptide(L)) [306 aa] | Main protease | |
| 3 | c | B 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 4 | d | B 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 84N (identity: 100.0 %/96.1 %) | |
| 5 | e | C 1 (A) | non-polymer(X77) | N-(4-tert-butylphenyl)-N-[(1R)-2-(cyclohexylamino)-2-oxo-1-(pyridin-3-yl)ethyl]-1H-imidazole-4-carboxamide | ||
| 6 | f | C 2 (A) | non-polymer(X77) | N-(4-tert-butylphenyl)-N-[(1R)-2-(cyclohexylamino)-2-oxo-1-(pyridin-3-yl)ethyl]-1H-imidazole-4-carboxamide | 25T 26T 41H 49M 140F 141L 142N 143G 144S 145C 163H 164H 165M 166E 187D 188R 189Q (identity: 100.0 %/96.1 %) | |
| 7 | g | D 1 (A) | non-polymer(MES) | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | ||
| 8 | h | D 2 (A) | non-polymer(MES) | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | 105R 134F(H) 181F 182Y 183G (identity: 80.0 %/96.1 %) | |
| 9 | i | E 1 (A) | non-polymer(MES) | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | ||
| 10 | j | E 2 (A) | non-polymer(MES) | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | 53N 56D 60R (identity: 100.0 %/96.1 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:6w79_A_2 identity=96.1% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:********************************** ********** ****************** ******************** * ***** ******:
6w79_A_2 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TT SSS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT E:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbebbbeeeeeeebebeebbeeeeeeebebebeeeebebebeeebebbbebebeeebeeebe:
Contact :aa aaaaaaaa a ff f f j j j d
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:********************************* ********************************************* ********************:
6w79_A_2 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SS B :
ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbebeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeebeeb:
Contact : h aaaaaaa h aaaaaffff fffa a a hhh fff
Contact : ff f
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:* **************************************************************** ***************** **************:
6w79_A_2 201:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHHS:
ExpBur :bbbbbbbbbbbbbbeeeebeeeeebeeeebbebbeeeebeebeeeebeebeebbeebebebeebbbbbbebbeeebeeeebeebeebebebbbebbeeeb:
Contact : aa aaa
queryA 301:SGVTFQ: 306
:******:
6w79_A_2 301:SGVTFQ: 306
SecStr : SS :
ExpBur :eeebee:
Contact :a
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