#WARNING:no index is registered index 'YP_009725301.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 6xa4 assembly_id=1

Protein Model on 6xa4 assembly_id=1 (TEMPLATE: 6xa4 assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [304 aa] main protease :R1AB_SARS2
2 b A 2 (A) polymer(polypeptide(L)) [304 aa] main protease :R1AB_SARS2 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 118Y 121S 122P 123S 124G 125V 126Y 127Q 137K 138G 139S 141L 280T 285A 286L 290E 298R 299Q 301S 302G 303V 304T 305F (identity: 100.0 %/100.0 %)
3 c B 1 (B) polymer(polypeptide(L)) [4 aa] inhibitor UAW241 41H 49M 140F 141L 142N 143G 144S 145C 163H 164H 165M 166E 187D 189Q 190T (identity: 100.0 %/100.0 %)
4 d B 2 (B) polymer(polypeptide(L)) [4 aa] inhibitor UAW241
5 e C 1 (A) non-polymer(GOL) GLYCEROL 62S 63N 64H (identity: 100.0 %/100.0 %)
6 f C 2 (A) non-polymer(GOL) GLYCEROL
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6xa4_A_1 identity=100.0%
queryA         2:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKY: 101
                :****************************************************************************************************:
6xa4_A_1       4:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKY: 103
SecStr          :         HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  TGGGGS  HHHHHHH  GGGEEEEETTEEE EEEEEEETTEEEEEESS  TT   E:    
ExpBur          :ebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeeeeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebee:    
Contact         :b bbbbbbbb  b                          c       c            eee                                     

queryA       102:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTIT: 201
                :****************************************************************************************************:
6xa4_A_1     104:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTIT: 203
SecStr          :EE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SSSS        B H:    
ExpBur          :eeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbebeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebebb:    
Contact         :                b  bbbbbbb         bbbcbcccc                 cccc                    c cc           
Contact         :                                       c                                                            

queryA       202:VNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCS: 301
                :****************************************************************************************************:
6xa4_A_1     204:VNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCS: 303
SecStr          :HHHHHHHHHHHHTT  TT  S    HHHHHHHHHHTTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHH  TT  BTTBSS      HHHHHHHHH:    
ExpBur          :bbbbbbbbbbbeeeeeebebeeebeeeebeebbeeeebeebeeeebeebeebbeeeebebeebbbbbeebbeeebeeeebeebeeeebbbbbebbebeee:    
Contact         :                                                                              b    bb   b       bb b

queryA       302:GVTF: 305
                :****:
6xa4_A_1     304:GVTF: 307
SecStr          :T   :    
ExpBur          :eeee:    
Contact         :bbbb                                                                                                


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