#WARNING:no index is registered index 'YP_009725301.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 6xhn assembly_id=1

Protein Model on 6xhn assembly_id=1 (TEMPLATE: 6xhn assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description b(query A)
1 a A 1 (A) polymer(polypeptide(L)) [301 aa] 3C-like proteinase :R1A_CVHSA 4R 5K 6M 7A 8F 9P 10S 11G 14E 122P 123S 124G 125V 126Y 127Q 128C 137K 138G 139S 141L 170G 298R 302G 303V 304T (identity: 100.0 %/95.4 %)
2 b A(queryA) B 1 (B) polymer(polypeptide(L)) [300 aa] 3C-like proteinase :R1A_CVHSA
3 c C 1 (A) non-polymer(V3D) (3S)-3-{[N-(4-methoxy-1H-indole-2-carbonyl)-L-leucyl]amino}-2-oxo-4-[(3S)-2-oxopyrrolidin-3-yl]butyl 2-cyanobenzoate
4 d D 1 (A) non-polymer(EDO) 1,2-ETHANEDIOL 4R 5K 6M 7A 125V (identity: 100.0 %/95.4 %)
5 e E 1 (B) non-polymer(V3D) (3S)-3-{[N-(4-methoxy-1H-indole-2-carbonyl)-L-leucyl]amino}-2-oxo-4-[(3S)-2-oxopyrrolidin-3-yl]butyl 2-cyanobenzoate 41H 49M 140F 141L 142N 143G 144S 145C 163H 164H 165M 166E 168P 172H 188R 189Q 190T 191A (identity: 100.0 %/95.4 %)
ALIGNMENTS
MODEL[2] Protein A "queryA" TEMPLATE:6xhn_B_1 identity=95.4%
queryA         3:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYK: 102
                :******************************** ********** ****************** ******************** * ***** ********:
6xhn_B_1       4:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK: 103
SecStr          :        HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  TTT SS  HHHHHHT  GGG EEEETTEEE EEEEEEETTEEEEEESS  TT  EEE:    
ExpBur          :eeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebbeeeeebebebeeeeebbbebebeeebeebbeee:    
Contact         : aaaaaaaa  a                          e       e                                                     
Contact         : dddd                                                                                               

queryA       103:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITV: 202
                :******************************* ********************************************* ********************* :
6xhn_B_1     104:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL: 203
SecStr          :E    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SSSS        B HH:    
ExpBur          :eeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebebbb:    
Contact         :                   aaaaaaa        aaaeaeeee                 eeee e a e               eeee           
Contact         :                      d               e                                                             

queryA       203:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSG: 302
                :**************************************************************** *********  ******  ****************:
6xhn_B_1     204:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMXXRTILGSTILEDEFTPFDVVRQCSG: 303
SecStr          :HHHHHHHHHHHTT  TT  S    HHHHHHHHHHTTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHH  --  BTTBSS   S  HHHHHHHHT :    
ExpBur          :bbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeebbeebeebbeeeeeebeebbbbbbebbeeee--eebeeeeeeebbbbbebbeeeeee:    
Contact         :                                                                                               a   a

queryA       303:VT: 304
                :**:
6xhn_B_1     304:VT: 305
SecStr          :  :    
ExpBur          :ee:    
Contact         :aa                                                                                                  


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