Protein Model on 6yz6 assembly_id=1
(TEMPLATE: 
6yz6
assembly_id:1
)Protein Model on 6yz6 assembly_id=1
(TEMPLATE: 6yz6
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [304 aa] | Main Protease :R1AB_SARS2 | 1S 2G 3F 4R 5K 6M 7A 8F 9P 10S 11G 14E 118Y 121S 122P 123S 124G 125V 126Y 127Q 128C 137K 138G 139S 140F 141L 166E 172H 283G 285A 286L 298R 299Q 300C 301S 302G 303V 304T (identity: 100.0 %/100.0 %) | |
| 2 | b | A(queryA) | A 2 (A) | polymer(polypeptide(L)) [304 aa] | Main Protease :R1AB_SARS2 | |
| 3 | c | B 1 (C) | polymer(polypeptide(L)) [4 aa] | LEUPEPTIN | ||
| 4 | d | B 2 (C) | polymer(polypeptide(L)) [4 aa] | LEUPEPTIN | 41H 49M 54Y 142N 143G 144S 145C 164H 165M 166E 187D 188R 189Q 190T (identity: 100.0 %/100.0 %) | |
| 5 | e | C 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 6 | f | C 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 222R 223F 224T 263D (identity: 100.0 %/100.0 %) | |
| 7 | g | D 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 8 | h | D 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 37Y 101Y 103F (identity: 100.0 %/100.0 %) | |
| 9 | i | E 1 (A) | non-polymer(IMD) | IMIDAZOLE | ||
| 10 | j | E 2 (A) | non-polymer(IMD) | IMIDAZOLE | 64H 65N 67L (identity: 100.0 %/100.0 %) | |
| 11 | k | F 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 12 | l | F 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 14E 15G 17M 18V 71G 97K (identity: 100.0 %/100.0 %) | |
| 13 | m | G 1 (A) | non-polymer(CL) | CHLORIDE ION | 284S 285A 286L (identity: 100.0 %/100.0 %) | |
| 14 | n | G 2 (A) | non-polymer(CL) | CHLORIDE ION | 284S 285A 286L (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:6yz6_A_2 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
6yz6_A_2 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTGGGS HHHHHHT GGG EEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eebeeeebebeebeebbbbbbbeebebbbbbbeeebbbbbbbbbeeebeeebebeebbeebeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:
Contact :aaaaaaaaaaa al ll h d d d jj j l l
Contact : l
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
6yz6_A_2 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT SSSS B :
ExpBur :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeebbbbbbbbbeeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebebeeeebb:
Contact :h h a aaaaaaaa aaaaadddd dda a dddd
Contact : d
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
6yz6_A_2 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHHH:
ExpBur :bbbbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeebbeebeebbeebebebeebbbbbbebbeeebeeeebeebeebbbbbbbebbebbe:
Contact : fff f amaa aaa
Contact : nmm
Contact : nn
queryA 301:SGVT: 304
:****:
6yz6_A_2 301:SGVT: 304
SecStr :HT :
ExpBur :eeee:
Contact :aaaa
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