#WARNING:no index is registered index 'YP_009725301.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 7ju7 assembly_id=1

Protein Model on 7ju7 assembly_id=1 (TEMPLATE: 7ju7 assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [304 aa] 3C-like proteinase :R1AB_SARS2
2 b A 2 (A) polymer(polypeptide(L)) [304 aa] 3C-like proteinase :R1AB_SARS2 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 122P 123S 124G 125V 126Y 127Q 137K 138G 139S 140F 141L 166E 170G 172H 280T 283G 285A 286L 290E 298R 299Q 301S (identity: 100.0 %/100.0 %)
3 c B 1 (A) non-polymer(G65) Masitinib 24T 25T 41H 44C 45T 46S 49M 140F 141L 142N 144S 145C 163H 164H 165M 166E (identity: 100.0 %/100.0 %)
4 d B 2 (A) non-polymer(G65) Masitinib
5 e C 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 84N 85C (identity: 100.0 %/100.0 %)
6 f C 2 (A) non-polymer(DMS) DIMETHYL SULFOXIDE
7 g D 1 (A) non-polymer(GOL) GLYCEROL 40R 52P 53N 54Y 55E (identity: 100.0 %/100.0 %)
8 h D 2 (A) non-polymer(GOL) GLYCEROL
9 i E 1 (A) non-polymer(GOL) GLYCEROL 165M 166E 188R 189Q 190T 192Q (identity: 100.0 %/100.0 %)
10 j E 2 (A) non-polymer(GOL) GLYCEROL
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7ju7_A_1 identity=100.0%
queryA         1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
                :****************************************************************************************************:
7ju7_A_1       1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr          :          HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  TTTSSS  HHHHHHT  GGGEEEEETTEEE EEEEEEETTEEEEEESS  TT  S:    
ExpBur          :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbebbbeeeeeeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:    
Contact         :bb bbbbbbbb  b         cc              gc  ccc  c  gggg                            ee               

queryA       101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
                :****************************************************************************************************:
7ju7_A_1     101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr          :EEE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SS S        B :    
ExpBur          :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbebeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:    
Contact         :                     bbbbbb         bbbbbc cc                 cccb   b b               iii i        
Contact         :                                       cc                       ic                                  
Contact         :                                                                 i                                  

queryA       201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
                :****************************************************************************************************:
7ju7_A_1     201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr          :HHHHHHHHHHHHHTT  TT  S    HHHHHHHHHHTTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHH  TT  BTTBSS      HHHHHHHS:    
ExpBur          :bbbbbbbbbbbbbeeeeebeeeeebeeeebbebbeeeebeebeeeebeebeebbebbebebeebbbbbbebbeeebeeeebeeeeeeebbbbbebbeeeb:    
Contact         :                                                                               b  b bb   b       bb 

queryA       301:SGVT: 304
                :****:
7ju7_A_1     301:SGVT: 304
SecStr          :    :    
ExpBur          :eeee:    
Contact         :b                                                                                                   


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