#WARNING:no index is registered index 'YP_009725301.1' in 'http://www.uniprot.org/uniprot/'
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model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
1 | a | C 1 (C) | polymer(polypeptide(L)) [300 aa] | Replicase, hydrolase domain :R1AB_CVPPU | 1S 4R 6M 7A 8F(Q) 9P 10S 11G 14E 122P 123S(G) 124G(S) 125V 126Y 127Q(G) 137K 138G 139S 140F 141L(I) 166E 172H 278G 280T 283G(S) 284S(Y) 285A(G) 290E 299Q 302G (identity: 73.3 %/44.9 %) | |
2 | b | A(queryA) | D 1 (D) | polymer(polypeptide(L)) [301 aa] | Replicase, hydrolase domain :R1AB_CVPPU | |
3 | c | V 1 (C) | non-polymer(SO4) | SULFATE ION | ||
4 | d | W 1 (C) | non-polymer(SO4) | SULFATE ION | ||
5 | e | X 1 (C) | non-polymer(SO4) | SULFATE ION | ||
6 | f | Y 1 (C) | non-polymer(SO4) | SULFATE ION | ||
7 | g | Z 1 (C) | non-polymer(SO4) | SULFATE ION | ||
8 | h | AA 1 (C) | non-polymer(DIO) | 1,4-DIETHYLENE DIOXIDE | ||
9 | i | BA 1 (C) | non-polymer(DIO) | 1,4-DIETHYLENE DIOXIDE | 1S 2G 214N (identity: 100.0 %/44.9 %) | |
10 | j | CA 1 (C) | non-polymer(MRD) | (4R)-2-METHYLPENTANE-2,4-DIOL | ||
11 | k | DA 1 (D) | non-polymer(SO4) | SULFATE ION | 131R 197D(N) (identity: 50.0 %/44.9 %) | |
12 | l | EA 1 (D) | non-polymer(SO4) | SULFATE ION | 169T(N) 193A(L) 194A(E) 195G (identity: 25.0 %/44.9 %) | |
13 | m | FA 1 (D) | non-polymer(SO4) | SULFATE ION | 215G 216D(E) 217R 218W 279R (identity: 80.0 %/44.9 %) | |
14 | n | GA 1 (D) | non-polymer(SO4) | SULFATE ION | 279R 280T (identity: 100.0 %/44.9 %) | |
15 | o | HA 1 (D) | non-polymer(SO4) | SULFATE ION | 116A 124G(S) 141L(I) (identity: 33.3 %/44.9 %) | |
16 | p | IA 1 (D) | non-polymer(MRD) | (4R)-2-METHYLPENTANE-2,4-DIOL | 41H 47E(T) 52P(I) 54Y 164H 165M(L) 187D 188R(Q) 189Q(P) (identity: 44.4 %/44.9 %) |
ALIGNMENTS |
MODEL[2] Protein A "queryA" TEMPLATE:1lvo_D_1 identity=44.9% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100 :** **** *** ** * * * * ****** * * ****** *** *** * ** * * * *** ** ** : 1lvo_D_1 1:SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRV-INYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPE: 99 SecStr : TTTGGGEEEEEETTEEEEEEEETTEEEEEGGGG S TTS - HHHHHHT GGG EEEETTEEE EEEEEEETTEEEEEESS TT : ExpBur :eebeeeeeebeebeebbbebbbeebebbbbbbbeebbbbbbbbbeeeeee-bebeeebeeeeeeebebbeeeeebebeebeeeebbbbbebeeebeeebe: Contact :ai a aaaaaa a p p p p Contact :i queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200 : ** * * * **** * * ** ** ****** * ***** * **** ** * * * ** ** * * ** : 1lvo_D_1 100:HKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMS: 199 SecStr : EE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BGGG SSSS B : ExpBur :eeeeebeebeebbbbbbeebeeeeeebbbbbeebbbeeebeebbbbbbbbbeeeeebbbbbbbbbebeeebbbbbbbebebbeebebbeeeeebeeeebb: Contact : o aaaaaa k aaaaa ppa l a ppp lll k Contact : o o queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300 : ** * **** *** *** * * * * * * * ** * * * * ***** * ***** * ** : 1lvo_D_1 200:SDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSS--TDAFSMLAAKTGQSVEKLLDSIVR-LNKGFGGRTILSYGSLCDEFTPTEVIRQM: 296 SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHTTTTB --GGGGHHHHHHHS HHHHHHHHHH-HHH TT BTTBSS S HHHHHHHH: ExpBur :bbbbbbbbbbbbeeeeeebbeeeebeeeebbebbeeeebeebee--eeebeebbeeeebebeebbbbbbe-beeebeeeebbeeeebbbebbbebbeeee: Contact : immmm ama aaa a a Contact : nn queryA 301:SGVTF: 305 : ** : 1lvo_D_1 297:YGVNL: 301 SecStr :H S : ExpBur :eeeee: Contact : a |