Protein Model on 4ylu assembly_id=2
(TEMPLATE: 
4ylu
assembly_id:2
)Protein Model on 4ylu assembly_id=2
(TEMPLATE: 4ylu
assembly_id:2
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | C 1 (C) | polymer(polypeptide(L)) [302 aa] | ORF1a protein :A0A0A7E693_9BETC | 1S 2G 4R(V) 5K 6M 7A(S) 8F(H) 9P 10S 11G 14E 122P 123S(T) 124G 125V(T) 126Y(F) 137K 138G 139S 140F 141L 166E 169T(N) 170G 172H 214N 280T(Q) 283G 285A(T) 286L(M) 298R(M) 299Q 300C(I) 302G (identity: 64.7 %/52.2 %) | |
| 2 | b | A(queryA) | D 1 (D) | polymer(polypeptide(L)) [304 aa] | ORF1a protein :A0A0A7E693_9BETC | |
| 3 | c | K 1 (C) | non-polymer(R30) | N-{4-[(1H-benzotriazol-1-ylacetyl)(thiophen-3-ylmethyl)amino]phenyl}propanamide | 1S (identity: 100.0 %/52.2 %) | |
| 4 | d | L 1 (C) | non-polymer(ACT) | ACETATE ION | ||
| 5 | e | M 1 (D) | non-polymer(R30) | N-{4-[(1H-benzotriazol-1-ylacetyl)(thiophen-3-ylmethyl)amino]phenyl}propanamide | 25T(M) 41H 44C 45T(P) 46S(A) 49M(L) 54Y 140F 141L 142N(C) 144S 145C 163H 164H(Q) 165M 166E 187D 188R(K) 189Q (identity: 63.2 %/52.2 %) | |
| 6 | f | N 1 (D) | non-polymer(ACT) | ACETATE ION | 197D 198T(K) (identity: 50.0 %/52.2 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:4ylu_D_1 identity=52.2% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQ---AGNVQLRVIGHSMQNCVLKLKVDTANPK: 97
:** ** *** ** ******** ******** * ***** * *** *** ** * ** *** ** ** *** ** *** :
4ylu_D_1 1:SGLVKMSHPSGDVEACMVQVTCGSMTLNGLWLDNTVWCPRHVMCPADQLSDPNYDALLISMTNHSFSVQKHIGAPANLRVVGHAMQGTLLKLTVDVANPS: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG GGGSSS HHHHHHT GGGEEEEE SSS EEE EEEEEEETTEEEEEESS TT:
ExpBur :eebeeeeeebeebeebbbbbebeeeebbbbbbeebbbbbebbbbeeeeeeebebeebbeebeeeebebebbeeeeeebebebeeeeebbbebebeeebee:
Contact :aa aaaaaaaa a e e eee e e
Contact :c
queryA 98:TPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTD: 197
:** * * ** ********* * * **** ******* ******* ***** *** * * * * ** * * * * **:
4ylu_D_1 101:TPAYTFTTVKPGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSCGSVGYTKEGSVINFCYMHQMELANGTHTGSAFDGTMYGAFMDKQVHQVQLTD: 200
SecStr : EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEEEETTEEEEE TTS BGGG SSSS :
ExpBur :ebeeeeeebeebebbbbbbbbebebeeeebbbbbbbebbeeebeeebbbbbbbeeeeeebbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeee:
Contact : aaaaa aaaaae ee eeea aa a eee f
Contact : ee e
queryA 198:TTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNY-EPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDV: 296
: *** ****** ** ** * ** * * ** * ** * * * * **** ******* **:
4ylu_D_1 201:KYCSVNVVAWLYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGTQSVDM---LAVKTGVAIEQLLYAIQQLY-TGFQGKQILGSTMLEDEFTPEDV: 296
SecStr : B HHHHHHHHHHHHHTT TT S HHHHHHHHHTTTB HHHHH---HHHHHT HHHHHHHHHHHH-H TT BTTBSS S HHHH:
ExpBur :eebbebbbbbbbbbbeeebeebeeeeebeeeebbeebeeeebeebeeeebbee---bbeebebbbbbbbebbbebe-eebeeeebeebeebebbbbbebb:
Contact :f a a a aa
queryA 297:VRQCSGV: 303
: * **:
4ylu_D_1 297:NMQIMGV: 303
SecStr :HHHHS :
ExpBur :bebeeee:
Contact : aaa a
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