#WARNING:no index is registered index 'YP_009725295.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 2ahm_G_1_C_1

Protein Model on 2ahm_G_1_C_1 (TEMPLATE: 2ahm )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) G 1 (G) polymer(polypeptide(L)) [191 aa] Replicase polyprotein 1ab, heavy chain :R1AB_CVHSA
2 b C 1 (C) polymer(polypeptide(L)) [74 aa] Replicase polyprotein 1ab, light chain :R1AB_CVHSA 4022R 4025V 4026T 4029M 4030Q 4033L 4036M 4037L 4040L 4042N 4044A 4045L 4048I 4049I 4052A 4053R 4057V 4058P 4061I 4062I 4064L 4073V (identity: 100.0 %/97.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2ahm_G_1 identity=97.4%
queryA      3943:AIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDN:4042
                :************** *************************************************************************************:
2ahm_G_1       6:AIASEFSSLPSYAAYATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDN: 105
SecStr          :  GGGSTTSHHHHHHHHHHHHHHHHHHTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  :    
ExpBur          :eeeeeeeebebeeebeebeeeeeebeeeeeeeebbeebeeebeebeeebeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeebeeeee:    
Contact         :                                                                               b  bb  bb  b  bb  b b

queryA      4043:DALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRA:4133
                :******************************* *** ******** *************************** ******************:
2ahm_G_1     106:DALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMDNSPNLAWPLIVTALRA: 196
SecStr          :HHHHHHHHHHHTT EESS    STT EEEEEE SHHHHHHHEETTEEE SSSEEEEEEEE TTS B  STT STTTGGGS SSEEEEEEE :    
ExpBur          :eeeeeeeebeeeebeeeeeebeeeebebebbbeebebbeebbeeeebebbebebebeebbbeeeeebeeeebeeeebeebeeebebbbeee:    
Contact         : bb  bb  bb   bb  bb b        b                                                                     


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