#WARNING:no index is registered index 'YP_009725295.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 6zru assembly_id=1

Protein Model on 6zru assembly_id=1 (TEMPLATE: 6zru assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [304 aa] Main Protease :R1AB_SARS2
2 b A 2 (A) polymer(polypeptide(L)) [304 aa] Main Protease :R1AB_SARS2 3264S 3265G 3266F 3267R 3268K 3269M 3270A 3271F 3272P 3273S 3274G 3277E 3381Y 3384S 3385P 3386S 3387G 3388V 3389Y 3390Q 3400K 3401G 3402S 3403F 3404L 3429E 3435H 3543T 3546G 3548A 3549L 3553E 3562Q 3563C 3564S 3565G 3566V 3567T (identity: 100.0 %/100.0 %)
3 c B 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 3337Q 3339R (identity: 100.0 %/100.0 %)
4 d B 2 (A) non-polymer(DMS) DIMETHYL SULFOXIDE
5 e C 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 3269M 3270A 3271F 3390Q (identity: 100.0 %/100.0 %)
6 f C 2 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 3386S (identity: 100.0 %/100.0 %)
7 g D 1 (A) non-polymer(U5G) boceprevir (bound form) 3304H 3312M 3317Y 3405N 3406G 3407S 3408C 3427H 3428M 3429E 3430L 3431P 3450D 3451R 3452Q 3453T 3455Q (identity: 100.0 %/100.0 %)
8 h D 2 (A) non-polymer(U5G) boceprevir (bound form)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6zru_A_1 identity=100.0%
queryA      3264:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK:3363
                :****************************************************************************************************:
6zru_A_1       1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr          :          HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  TTGGGS  HHHHHHT  GGG EEEETTEEE EEEEEEETTEEEEEESS  TT  S:    
ExpBur          :eebeeeeeebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:    
Contact         :bbbbbbbbbbb  b                          g       g    g                   c c                        
Contact         :     eee                                                                                            

queryA      3364:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI:3463
                :****************************************************************************************************:
6zru_A_1     101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr          :EEE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEEETTTEEEEE TTS BSSS  SSSS        B :    
ExpBur          :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeeeeeeeeeeb:    
Contact         :                 b  bbbbbbb         bbbbbgggg                  ggbgg   b              gggg g        
Contact         :                      f   e                                      g                                  

queryA      3464:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC:3563
                :****************************************************************************************************:
6zru_A_1     201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr          :HHHHHHHHHHHHHTT  TT  S    HHHHHHHHHHHTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHH  TT  BTTBSS      HHHHHHHH:    
ExpBur          :bbbbbbbbbbbbebeeeebeeeeebeeeebbebbeeeebeebeeeebeebeebeeebebebeebbbbbbebbeeebeeeebeeeeeeebbbbbebbeeee:    
Contact         :                                                                               b  b bb   b        bb

queryA      3564:SGVT:3567
                :****:
6zru_A_1     301:SGVT: 304
SecStr          :HT  :    
ExpBur          :eeee:    
Contact         :bbbb                                                                                                


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