Protein Model on 1lvo_C_1_HA

#WARNING:no index is registered index 'YP_009725301.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 1lvo_C_1_HA_1

Protein Model on 1lvo_C_1_HA_1 (TEMPLATE: 1lvo )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	C 1 (C)	polymer(polypeptide(L)) [300 aa]	Replicase, hydrolase domain :R1AB_CVPPU
2	b		HA 1 (D)	non-polymer(SO4)	SULFATE ION	6M 298R (identity: 100.0 %/45.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1lvo_C_1 identity=45.2%

queryA         1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
                :** **** *** ** * * *  *   ****** * * ******         ***        *** *   ** * *         * ***   ** ** :
1lvo_C_1       1:SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRV-INYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPE:  99
SecStr          :          TTTGGGEEEEEETTEEEEEEEETTEEEEEGGGG S  SS -  HHHHHHT  GGG EEEETTEEE EEEEEEETTEEEEEESS  TT  S:    
ExpBur          :eebeeeeeebeebeebbbebbbeeeebbbbbbeeebbbbbbbbbeeeeee-bebeeeeeebeeeebebbeeeeebeeeebeeeebbbbbebeeebeeebe:    
Contact         :     b                                                                                              

queryA       101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
                : **  *  *  *  **** * *  **   **   ******  * *****         * **** **  * * *   **  **   *    *  **    :
1lvo_C_1     100:HKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMS: 199
SecStr          : EE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BGGG  SSS      S  B :    
ExpBur          :eeeeebeebeebbbbbbeebeeeeeebbbbbeebbbebebeeebebbbbbbeeeeebbbbbbbbbebeeebbbbbbbebebbeebebbeeebebeebebb:    

queryA       201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
                :  ** * **** *** ***       *   *  *       *     *    * * **  *     *    *  *  *****    * *****  * ** :
1lvo_C_1     200:SDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSS--TDAFSMLAAKTGQSVEKLLDSIVR-LNKGFGGRTILSYGSLCDEFTPTEVIRQM: 296
SecStr          :HHHHHHHHHHHHHTT  TT  S    HHHHHHHHHTTTB     --SGGGHHHHHHHT  HHHHHHHHHH-HHH  TT  BTTBSS    S HHHHHHHH:    
ExpBur          :bebbbbbbbbbbeeeeeebbeeeebeeeebbebbeeeebeebee--eeebeebbeeeebebebbbbbbee-beeebeeeebbeeeebbbebbbebbbeeb:    
Contact         :                                                                                                 b  

queryA       301:SGV: 303
                : **:
1lvo_C_1     297:YGV: 299
SecStr          :T  :    
ExpBur          :eee:

Protein Model on 1lvo_C_1_HA_1 (TEMPLATE: 1lvo )

Input Residue Numbers for Focused Sites