Protein Model on 2q6f_B_1_A_1
(TEMPLATE: 
2q6f
)Protein Model on 2q6f_B_1_A_1
(TEMPLATE: 2q6f
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [295 aa] | Infectious bronchitis virus (IBV) main protease :Q3Y5H1_9CORO | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [294 aa] | Infectious bronchitis virus (IBV) main protease :Q3Y5H1_9CORO | 1S 2G 4R(K) 6M(L) 7A(V) 9P 10S 11G(S) 14E 122P(V) 123S(I) 124G 125V(L) 126Y 127Q(P) 137K(R) 138G(A) 139S 140F 141L 166E 170G(A) 172H 283G 284S(Q) 285A(Y) 286L(N) 299Q (identity: 50.0 %/43.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2q6f_B_1 identity=43.4% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGN-VQLRVIGHSMQNCVLKLKVDTANPKTP: 99
:*** * ** ** * * * ****** * ****** * * ** * * * * * * ** * ** **:
2q6f_B_1 3:SGFKKLVSPSSAVEKCIVSVSYRGNNLNGLWLGDSIYCPRHVLG---KFSGDQWGDVLNLANNHEFEVVTQNGVTLNVVSRRLKGAVLILQTAVANAETP: 99
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG ---S TTHHHHHHHTS GGG EEE SSS EE EEEEEEETTEEEEEESS TT :
ExpBur :eeeeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbebbe---eeeeeebbeebeebeeeebebebeeeeebebeeeeeeebbbbbebeeebeeee:
Contact :bb b bb bbb b
queryA 100:KYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTT: 199
:***** * * * * * * ** * ** *** * ******** * * **** *** * **** * *** ** ** * :
2q6f_B_1 100:KYKFVKANCGDSFTIACSYGGTVIGLYPVTMRSNGTIRASFLAGACGSVGFNIEKGVVNFFYMHHLELPNALHTGTDLMGEFYGGYVDEEVAQRVPPDNL: 199
SecStr :SEEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEEETTTEEEEE TTS BGGG SSSS B:
ExpBur :eeebbebeebeebbbbbbeebebeeebebbbbebbbbeeebeeebbbbbbbbeeeeebbbbbbbbbebeeebbbbbbbebebbeebebeeeeeeeeeeee:
Contact : bbbbbb bbbbb b b b
queryA 200:ITVNVLAWLYAAVIN-------GDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRT--ILGSALLEDE: 290
: * * ****** * * * * * * * * *** ** * * * *** ***:
2q6f_B_1 200:VTNNIVAWLYAAIISVXXXXXXXPKW-LESTTVSIEDYNRWASDNGFTPFSTSTA--ITKLSAITGV---DVCKLLRTIMVKSAQWGSDPILGQYNFEDE: 293
SecStr : HHHHHHHHHHHHHH ------- TT- SS HHHHHHHHHHHTB HH--HHHHHHHH --- HHHHHHHHHHHHH S BTTBSS S:
ExpBur :bbbbbbbbbbbbbeee-------eeb-eeeeebeeeebeeebeeeebbebeebeb--beebeeeeeb---ebbebbebbbebeeebeeeebeeeeebbbb:
Contact : bbbb
queryA 291:FTPFDVVRQ: 299
: ** * *:
2q6f_B_1 294:LTPESVFNQ: 302
SecStr :S HHHHHHT:
ExpBur :bbbebbeeb:
Contact : b
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[assembly_id:1]
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