Protein Model on 3d23_C_1_A

#WARNING:no index is registered index 'YP_009725301.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 3d23_C_1_A_1

Protein Model on 3d23_C_1_A_1 (TEMPLATE: 3d23 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	C 1 (C)	polymer(polypeptide(L)) [298 aa]	3C-like proteinase :R1AB_CVHN1
2	b		A 1 (B)	polymer(polypeptide(L)) [301 aa]	3C-like proteinase :R1AB_CVHN1	221N(Q) 222R(N) 223F(D) 270E(R) 273Q(M) 277N(Q) 279R (identity: 14.3 %/49.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3d23_C_1 identity=49.3%

queryA         2:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKY: 101
                :*  **  *  * * * * ** *  ********* ********* *  *  * *  ** *     *    *   * *    ** * * * *   ** ****:
3d23_C_1       4:GIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKY: 103
SecStr          :         TTTGGGEEEEEETTEEEEEEEETTEEEEEGGGG  TTTSSS  HHHHHHH  GGGEEEEETTEEE EEEEEEETTEEEEEESS  TT  SE:    
ExpBur          :eeeeeeeeeeebeebbbbbbbeebebbbbbbeeebbbbbbbbbeeeeeeebebeebeeebeeeebebeeeeeebebeeeeeeebbbbbbbeeebeeebee:    

queryA       102:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTIT: 201
                : *    ** ** *** *** * *     **   ******* *******     * * * ***  ** ** * ***  ******  * *  *    *   *:
3d23_C_1     104:TFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQT: 203
SecStr          :EE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT  SSSS        B H:    
ExpBur          :eebebeebebbbbbbbbebeeeeeebbbbbebebbeeebeeebbbbbbbeeeeebbebbbbbbbebeeebbbbbbbebebbeebebbeeebeeeeeeebb:    

queryA       202:VNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCS: 301
                :*** ******  *   **         ***  **         * *  *  *   **       *  * *   *  ** ****   ***  * **  *  :
3d23_C_1     204:VNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLV--LDALASMTGVSIETLLAAIKRLYM-GFQGRQILGSCTFEDELAPSDVYQQLA: 300
SecStr          :HHHHHHHHHHHHTT  TT  S    HHHHHHHHHHHTB      HH--HHHHHHHHS  HHHHHHHHHHHTT-  TT  SSS SS   SS HHHHHHHHT:    
ExpBur          :bbbbbbbbbbbeeebeebeeeeebeeeebbeebeeeebbebeeeee--beebbeeeebebebbbbbbeebee-ebeeeebeeeeebebbbbbebbeeeee:    
Contact         :                   bbb                                              b  b   b b                      

queryA       302:G: 302
                :*:
3d23_C_1     301:G: 301
SecStr          : :    
ExpBur          :e:

Protein Model on 3d23_C_1_A_1 (TEMPLATE: 3d23 )

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