Protein Model on 3d23_D_2_A_1
(TEMPLATE: 
3d23
)Protein Model on 3d23_D_2_A_1
(TEMPLATE: 3d23
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | D 2 (D) | polymer(polypeptide(L)) [299 aa] | 3C-like proteinase :R1AB_CVHN1 | |
| 2 | b | A 1 (B) | polymer(polypeptide(L)) [301 aa] | 3C-like proteinase :R1AB_CVHN1 | 1S 2G 4R(V) 5K 6M 7A(V) 9P 10S(T) 11G(S) 14E 121S(R) 123S(Q) 124G 125V(A) 126Y(F) 137K 138G 139S 141L 169T 170G 171V(C) 215G(N) 280T(Q) 285A(C) 286L(T) 298R(Q) 299Q 300C(L) (identity: 48.3 %/49.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3d23_D_2 identity=49.5% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:** ** * * * * * ** * ********* ********* * * * * ** * * * * * ** * * * * ** ***:
3d23_D_2 3:SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK: 102
SecStr :- TTTGGGEEEEEETTEEEEEEEETTEEEEEGGGG GGGSSS HHHHGGG GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :-eeeeeeeeeeebeebbbbbbbeeeebbbbbbeeebbbbbbbbbeeeeeeebebeebeeebeeeebebebeeeebebeeeeeeebbbbbbbeeebeeebe:
Contact :bb bbbb bbb b
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:* * ** ** *** *** * * ** ******* ******* * * * *** ** ** * *** ****** * * * * :
3d23_D_2 103:YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ: 202
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT SSSS B :
ExpBur :eeebebeebebbbbbbbbebeeeeeebbbbbebebbeeebeeebbbbbbbeeeeebbebbbbbbbebeeebbbbbbbebebbeebebbeeebeeeeeeeb:
Contact : b bbbb bbb b bbb
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:**** ****** * ** *** ** * * * * ** * * * * ** **** *** * ** * :
3d23_D_2 203:TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLV--LDALASMTGVSIETLLAAIKRLYM-GFQGRQILGSCTFEDELAPSDVYQQL: 299
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHHTB HH--HHHHHHHHS HHHHHHHHHHHTT- TT SSS SS SS HHHHHHHH:
ExpBur :bbbbbbbbbbbbeeebeebeeeeebeeeebbeebeeeebbebeeeee--beebbeeeebebebbbbbbeebee-ebeeeebeeeeebebebbbebbeeee:
Contact : b b bb bbb
queryA 301:SG: 302
: *:
3d23_D_2 300:AG: 301
SecStr :T :
ExpBur :ee:
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[assembly_id:2]
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