Protein Model on 3sna_A_2_B

#WARNING:no index is registered index 'YP_009725301.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 3sna_A_2_B_2

Protein Model on 3sna_A_2_B_2 (TEMPLATE: 3sna )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 2 (A)	polymer(polypeptide(L)) [301 aa]	3C-like proteinase :R1A_CVHSA
2	b		B 2 (H)	polymer(polypeptide(L)) [6 aa]	Peptide aldehyde inhibitor Ac-NSFSQ-H	41H 49M 140F 141L 142N 143G 144S 145C 163H 164H 165M 166E 168P 187D 190T 191A 192Q (identity: 100.0 %/96.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3sna_A_2 identity=96.0%

queryA         1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
                :********************************** ********** ****************** ******************** * ***** ******:
3sna_A_2       1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK: 100
SecStr          :          HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  TTTTTS  HHHHHHT  TTT EEEETTEEE B   EEETTEEEEEBS   TT  S:    
ExpBur          :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeebeebebeeeeeebebeeeeeeebbbebebeeebeeeee:    
Contact         :                                        b       b                                                   

queryA       101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
                :********************************* ********************************************* ********************:
3sna_A_2     101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI: 200
SecStr          :EEE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SS S        B :    
ExpBur          :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebebeeeeeb:    
Contact         :                                       bbbbbb                 bbbb b                  b  bbb        

queryA       201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
                :* **************************************************************** *****************  **************:
3sna_A_2     201:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 300
SecStr          :HHHHHHHHHHHHHHT  TT  S    HHHHHHHHHHTTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHHTTSS  BTTBSS  TT  HHHHHHH :    
ExpBur          :bbbbbbbbbbbbeeeeeebebeeebeeeebbebbeeeebeebeeeebeebeebbeebebebeebbbbbeebbeeebeeeebeeeeebebbbbbebbeeeb:    

queryA       301:S: 301
                :*:
3sna_A_2     301:S: 301
SecStr          : :    
ExpBur          :e:

Protein Model on 3sna_A_2_B_2 (TEMPLATE: 3sna )

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