Protein Model on 5gwz_B_1_D_1
(TEMPLATE: 
5gwz
)Protein Model on 5gwz_B_1_D_1
(TEMPLATE: 5gwz
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | B 1 (A) | polymer(polypeptide(L)) [299 aa] | PEDV main protease :R1A_PEDV7 | |
| 2 | b | D 1 (E) | polymer(polypeptide(L)) [6 aa] | N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE | 25T(M) 26T(A) 27L 41H 47E(T) 140F 142N 143G 145C 163H 164H(Q) 165M(L) 166E 167L 168P(G) 172H 188R(Q) 189Q(P) 190T 191A(L) 192Q (identity: 57.1 %/46.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5gwz_B_1 identity=46.1% |
queryA 2:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSE-DMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:* **** *** ** * * * * ****** * * ****** * * * *** *** * * * * ** * ***:
5gwz_B_1 7:GLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDIVMCPRHVIASSTTSTIDYDYALSVLRL--HNFSISSGNVFLGVVSATMRGALLQIKVNQNNVHTPK: 104
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG S SSS HHHHHHH G--GGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :ebebeeeebeebeebbbebbbeeeebbbbbbbeebbbbbbbbbeeeeeebebeebeeebee--eebebbeeeeebebeebeeeebbbebebeeebeeebe:
Contact : bbb b b
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:* ** * **** * *** ** * ** *** ** *** * ** * *** * ** * * * ** * ** * * * * :
5gwz_B_1 105:YTYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYNINNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLF: 204
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BGGG SSSS B :
ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbebebbebebeeebbbbbbbeeeeebbbbbbbbbeebeeebbbbbbbebebbeebebbeeeeeeeeeeeb:
Contact : b bb b bbbbbb b bbbbb
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:* **** **** *** * * ** * * * * * ** * ** * * * *** * **** **** :
5gwz_B_1 205:TENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMT--TVGNTDCFSILAAKTGVDVQRLLASIQSLHKN-FGGKQILGHTSLTDEFTTGEVVRQM: 301
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHTTTTB -- GGGHHHHHHHT HHHHHHHHHHHTT - SS BTTBSS HHHHHHHH:
ExpBur :bebbbbbbbbbbeeebeebeeeeebebeebbeebeeeebb--ebeeeeebeebeeeeebebeebbbbbeebbee-beeeebeeeeebbbebbbebbbeee:
queryA 301:SGV: 303
: **:
5gwz_B_1 302:YGV: 304
SecStr :H :
ExpBur :eee:
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[assembly_id:1]
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