Protein Model on 5hyo_B_1_A_1
(TEMPLATE: 
5hyo
)Protein Model on 5hyo_B_1_A_1
(TEMPLATE: 5hyo
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [301 aa] | PEDV 3CLpro :A0A075EBR7_9ALPC | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [301 aa] | PEDV 3CLpro :A0A075EBR7_9ALPC | 1S(A) 2G 3F(L) 4R 5K 6M 7A 8F(Q) 9P 10S 11G 14E 122P(A) 123S(A) 124G 125V 126Y 127Q(G) 128C(V) 137K(R) 138G 139S 140F 141L(I) 166E 170G 172H 272L(H) 274N 278G 279R(K) 282L 283G 284S(Y) 285A(T) 290E 299Q 300C(M) (identity: 63.2 %/45.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5hyo_B_1 identity=45.7% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSE-DMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTP: 99
: * **** *** ** * * * * ****** * * ****** * * * *** *** * * * * * ** * **:
5hyo_B_1 1:AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTSTIDYDYALSVLRL--HNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTP: 98
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGGS SS SS HHHHHHT G--GGEEEEETTEE EEEEEEETTEEEEEESS TT :
ExpBur :eebeeeeeebeebeebbbebbbeeeebbbbbbeebbbbbbbbbbeeeeeebebeebeeebee--eebebbeeeeebeeeeeeeeebbbebebeeebeeee:
Contact :bbbbbbbbbbb b
queryA 100:KYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTT: 199
:** ** * **** ** *** ** * ** *** ** *** * ** * *** * ** * * * ** * ** * * * * :
5hyo_B_1 99:KYTYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYNINNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSL: 198
SecStr : EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BGGG SSSS B:
ExpBur :eeeeeebeebebbbbbbbbebeeeeeebbbbbebebbeeebeeebbbbbbbebeeeebbbbbbbbbebeeebbbbbbbebebbeebebbeeebeeeeeee:
Contact : bbbbbbb bbbbb b b b
queryA 200:ITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQ: 299
: * **** **** *** * * ** * * * * ** * ** * * * *** * **** * **:
5hyo_B_1 199:FTENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVV--NTDCFSILAAKTGVDVQRLLASIQSLHKN-FGGKQILGYTSLTDEFTTGEVIRQ: 295
SecStr : HHHHHHHHHHHHHTT TT S HHHHHHHHTTTTB -- TTTTHHHHHHHT HHHHHHHHHHHHT - S SSSSSSS HHHHHHH:
ExpBur :ebbbbbbbbbbbbeeebeebebeeebeeeebbeebeeeebbebe--eeeebeebeeeeebebeebbbbbeebeee-eeeeebeeeeebbbbbbbbbbbee:
Contact : b b bb bbbb b b
queryA 300:CSGVTF: 305
: ** :
5hyo_B_1 296:MYGVNL: 301
SecStr :HH :
ExpBur :beeeee:
Contact :b
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[assembly_id:1]
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