Protein Model on 5nh0_A_2_A_1
(TEMPLATE: 
5nh0
)Protein Model on 5nh0_A_2_A_1
(TEMPLATE: 5nh0
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 2 (A) | polymer(polypeptide(L)) [299 aa] | Replicase polyprotein 1ab :R1AB_CVHNL | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [299 aa] | Replicase polyprotein 1ab :R1AB_CVHNL | 1S 2G 4R(K) 5K 6M 7A 9P 10S 11G 14E 15G(R) 122P(A) 123S 124G 125V 126Y(F) 127Q(G) 137K 138G 139S 140F 141L(I) 166E 170G 172H 285A 286L(S) 290E 298R(K) 299Q 301S(Y) (identity: 71.0 %/45.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5nh0_A_2 identity=45.3% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:** *** *** ** * * * * * *** ** * * ****** * * * *** * * * * * * ** ** * ***:
5nh0_A_2 1:SGLKKMAQPSGCVERCVVRVCYGSTVLNGVWLGDTVTCPRHVIAPSTTVL-IDYDHAYSTMRLHNFSVSHNGVFLGVVGVTMHGSVLRIKVSQSNVHTPK: 99
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG S SSS - HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eebebeebebeebeebbbebbbeeeebbbbbbeeebbbbbbbbbeeeeee-bebeebeeebeeeebebbeeeeebbeeebebeebbbebebeeebeeebe:
Contact :bb bbbb bbb bb
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYD-CVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTT: 199
: * ** * **** * *** * ******** ** *** * * * * *** * ** * * * * * ** * * * :
5nh0_A_2 100:HVFKTLKPGDSFNILACYEGIASGVFGVNLRTNFTIKGSFINGACGSPGYNVRNDGTVEFCYLHQIELGSGAHVGSDFTGSVYGNFDDQPSLQVESANLM: 199
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEE TTS EEEEEEEEEE TTS EEEE TTS BGGG SSS B:
ExpBur :eeeeebeeeeebbbbbbeebeeeeeebbbbeebebbeeebeeebbbbbbbbbeeeebbbbbbbbbbebeeebbbbbbbebebbeebebbeeeeebeeeee:
Contact : bbbbbb bbbbb b b b
queryA 200:ITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQ: 299
: ** * **** ** ** * ** ** * * * * ** * ** * * * *** * * **** ** *:
5nh0_A_2 200:LSDNVVAFLYAALLNGCRWWLCSTRVNVDGFNEWAMANGYTSVSS--VECYSILAAKTGVSVEQLLASIQH-LHEGFGGKNILGYASLCDEFTLAEVVKQ: 296
SecStr : HHHHHHHHHHHHHTT TT S HHHHHHHHHHHTB --GGGGHHHHHHH HHHHHHHHHH-HHT TT BTTBSS HHHHHHH:
ExpBur :bbebbbbbbbbbbeeebeebebeeebeeeebbebbeeeebbebee--eeebeebeeebebebebbbbbbee-beeebeeeebeeeeebbbebbeebbeee:
Contact : bb b bb
queryA 300:CSG: 302
: *:
5nh0_A_2 297:MYG: 299
SecStr :HT :
ExpBur :bee:
Contact : b
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[assembly_id:1]
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