Protein Model on 6fv1_B_1_I_1
(TEMPLATE: 
6fv1
)Protein Model on 6fv1_B_1_I_1
(TEMPLATE: 6fv1
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [299 aa] | Replicase polyprotein 1ab :R1AB_CVHNL | |
| 2 | b | I 1 (B) | non-polymer(E8E) | (2~{S})-4-methyl-~{N}-[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]-2-[[(~{E})-3-phenylprop-2-enoyl]amino]pentanamide | 26T(V) 41H 52P(I) 140F 141L(I) 142N 143G 144S(A) 145C 163H 164H(Q) 165M(I) 166E 168P(G) 187D 188R(Q) 189Q(P) 190T(S) 191A(L) (identity: 42.1 %/45.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6fv1_B_1 identity=45.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:** *** *** ** * * * * * *** ** * * ****** * * * *** * * * * * * ** ** * ***:
6fv1_B_1 1:SGLKKMAQPSGCVERCVVRVCYGSTVLNGVWLGDTVTCPRHVIAPSTTVL-IDYDHAYSTMRLHNFSVSHNGVFLGVVGVTMHGSVLRIKVSQSNVHTPK: 99
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG S SSS - HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eebebeeeebeebeebbbebbbeeeebbbbbbeebbbbbbbbbbeeeeee-bebeebeeebeeeebebbbeeeebeeeebeeeebbbebebeeebeeebe:
Contact : b b b
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYD-CVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTT: 199
: * ** * **** * *** * ******** ** *** * * * * *** * ** * * * * * ** * * * :
6fv1_B_1 100:HVFKTLKPGDSFNILACYEGIASGVFGVNLRTNFTIKGSFINGACGSPGYNVRNDGTVEFCYLHQIELGSGAHVGSDFTGSVYGNFDDQPSLQVESANLM: 199
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEE TTS EEEEEEEEEE TTS EEEE TTS BGGG SSSS B:
ExpBur :eeeeebeeeeebbbbbbeebeeeeeebbbbeebebbeeebeeebbbbbbbbeeeeebbbbbbbbbbebeeebbbbbbbebebbeebebbeeebebeeeee:
Contact : bbbbbb bbbb b bbbbb
queryA 200:ITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQ: 299
: ** * **** ** ** * ** ** * * * * ** * ** * * * *** * **** ** *:
6fv1_B_1 200:LSDNVVAFLYAALLNGCRWWLCSTRVNVDGFNEWAMANGYTSVSS--VECYSILAAKTGVSVEQLLASIQH-LHEGFGGKNILGYSSLCDEFTLAEVVKQ: 296
SecStr : HHHHHHHHHHHHHTT TT HHHHHHHHHHHTB --GGGGHHHHHHH HHHHHHHHHH-HHT TT BTTBSS HHHHHHH:
ExpBur :bbebbbbbbbbbbeeebeebbeeeebeeeebbebbeeeebeebee--eeebeebeeebebebebbbbbbee-beeebeeeebeeeeebbbebbbebbeee:
queryA 300:CSG: 302
: *:
6fv1_B_1 297:MYG: 299
SecStr :HH :
ExpBur :bee:
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[assembly_id:2]
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