Protein Model on 5vqi_A_1_C_1 (TEMPLATE: 5vqi )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IMA1_HUMAN) A 1 (B) polymer(polypeptide(L)) [421 aa] Importin subunit alpha :Q9C2K9_NEUCS
2 b C 1 (C) polymer(polypeptide(L)) [6 aa] Nuclear localization sequence of NIT2 transcription factor (NIT2-NLS) 280D 281G 315R 319N 321V 322T 323G 325D 328T 354E 357W 360S 361N 364A 365G 396E 399W (identity: 100.0 %/50.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5vqi_A_1 identity=50.7%
queryA        81:IVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISE: 180
                : * *  **    * ***   ***** *  ***   *  *    ** ** *      *** **********   **  *   ** * *  ** **     *:
5vqi_A_1      33:MVEGVFSSEIDKQIQATTKFRKLLSKERNPPIEEVIKTGVVGRFVEFL-RSPHTLVQFEAAWALTNIASGSATQTQVVIEAGAVPIFVELLGSPEPDVRE: 131
SecStr          :HHHHHHSS HHHHHHHHHHHHHHTT SS   HHHHHHHT HHHHHHHT-T S HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHHTT SSHHHHH:    
ExpBur          :beebbebeeeeebbebbbebbeebebeeeebbeebbeeebbebbbebb-ebeeeebbbbbbebbbbbbeeeeebbeebbeeebbebbbebbebeeeebeb:    

queryA       181:QAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTD: 280
                :************    ** *   **  *** **      *     *** ****** ** * * *        ** *  *    * *** * ******* *:
5vqi_A_1     132:QAVWALGNIAGDSPQCRDYVLSCGALRPLLTLLG----DSRKLSMLRNATWTLSNFCRGKTPQPDWNTIAPALPVLAKLVYSLDDEVLIDACWAISYLSD: 227
SecStr          :HHHHHHHHHHTT HHHHHHHHHTT HHHHHHHHH----H   HHHHHHHHHHHHHHH   TT   HHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHHS:    
ExpBur          :bbbebbbbbbeeebebbeebbeeebbeebbebbe----eeeeeebbebbbebbbbbbeeeeeebebeebbebbebbbebbeeebeebbeebbebbbbbbe:    
Contact         :                                                                                                   b

queryA       281:GPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVP: 380
                :* *  *  *   *    ** **        *****  ****** * **** *  ***    ***   *  * *** ** ******   *** *      *:
5vqi_A_1     228:GSNDKIQAVIEAGIPRRLVELLMHASTSVQTPALRSVGNIVTGDDVQTQVIINCGALPCLLSLLSSNKDGIRKEACWTISNITAGNSAQIQSVIDANIIP: 327
SecStr          :S HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHTTS HHHHHHHHHTT HH:    
ExpBur          :eeeebbeebbeeebbeebbebbeeeeeebbebbbebbbbbbebeeebbeebbebebbebbeebbebeeeebbebbbebbbebbebeeebbeebbebebbe:    
Contact         :b                                 b   b bbb b  b                         b  b  bb  bb               

queryA       381:FLVSVLSKADFKTQKEAVWAVTNYTSGG--TVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAE--------KLGETEKLSIMIEECGGL: 470
                : *   ** ** ** *** **  * ****     ** ***  * * **  **   * *** * **   **    *                   ****** :
5vqi_A_1     328:PLIHLLSHADLKTRKEACWAISNATSGGLQKPDQIRYLVAQGCIKPLCDLLACPDNKIIQVALDGLENILKVGELDKNAAXXXXXSINRYALFIEECGGM: 427
SecStr          :HHHHHTTSS HHHHHHHHHHHHHTTTTTTT THHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHHHHHHHHHT -----   HHHHHHHHHTHH:    
ExpBur          :ebbebbebeeeebeebbbebbbbbbebeeeeeebbeebbeeebbebbbebbebeeeebbbbbbebbbebbebbeeeeeee-----eebebbebbeeeebe:    
Contact         :               b  b                                                                                 

queryA       471:DKIEALQNHENESVYKASLSLIEKYFS: 497
                : **   *   **  *      ******:
5vqi_A_1     428:EKIHDCQTNANEEIYMKAYNIIEKYFS: 454
SecStr          :HHHHGGGG   HHHHHHHHHHHHHH  :    
ExpBur          :eebeebeebebeebeeebeebbeebbe:    


Input Residue Numbers for Focused Sites

ex) 2,15,123