#WARNING:no index is registered index 'YP_009725295.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 6vh2_A_1_C_1

Protein Model on 6vh2_A_1_C_1 (TEMPLATE: 6vh2 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [299 aa] Orf1a protein :A0A1L2E0X0_9BETC
2 b C 1 (A) non-polymer(QZ4) 4,4-difluorocyclohexyl [(2S)-3-cyclohexyl-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-1-oxopropan-2-yl]carbamate 3304H 3312M(L) 3317Y 3403F 3404L 3405N(C) 3406G 3407S 3408C 3426H 3427H(Q) 3428M 3429E 3435H 3450D 3451R(K) 3452Q 3453T(V) 3454A(H) 3455Q (identity: 70.0 %/52.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6vh2_A_1 identity=52.0%
queryA      3263:QSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQ---AGNVQLRVIGHSMQNCVLKLKVDTANP:3359
                : **  **  *** ** ********  ********  * ***** *       ***  ***   ** * **        *** ** **   *** ** ***:
6vh2_A_1       7:HSGLVKMSHPSGDVEACMVQVTCGSMTLNGLWLDNTVWCPRHVMCPADQLSDPNYDALLISMTNHSFSVQKHIXXXANLRVVGHAMQGTLLKLTVDVANP: 106
SecStr          :           HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  STT SS  HHHHHHT  GGGEEEE   --- EE EEEEEEETTEEEEEESS  T:    
ExpBur          :eeebeeeeeebeebeebbbbbbbeebebbbbbbeeebbbbbebbbeeeeeeebebeebbeebeeeebebeeee---eebbbebeeeeebbbbbebeeebe:    
Contact         :                                         b       b    b                                             

queryA      3360:KTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGT:3459
                : ** * *    **  ********* * *     **** ******* *******         ***** ***  * * *    *  ** * * *  *   *:
6vh2_A_1     107:STPAYTFTTVKPGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSCGSVGYTKEGSVINFCYMHQMELANGTHTGSAFDGTMYGAFMDKQVHQVQLT: 206
SecStr          :T   EEE    TT EEEEEEEETTEEEEEEEEE  TTS B S   TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BGGG  SSSS      :    
ExpBur          :eebeeeeeebeebeebbbbbbbebbeeeeeebbbbbbebbeeebeeebbbbbbbbeeeeebbbbbbbbbebeeebbbbbbbebebbeebebeeeebebee:    
Contact         :                                           bbbbbb                 bbbb     b              bbbbbb    

queryA      3460:DTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNY-EPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFD:3558
                :*    *** ******  **  **     *    **  *      *      **    *   ** *          *   *  *  ****  ******* *:
6vh2_A_1     207:DKYCSVNVVAWLYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGTQSVDM---LAVKTGVAIEQLLYAIQQLY-TGFQGKQILGSTMLEDEFTPED: 302
SecStr          :  B HHHHHHHHHHHHHTT  TT  S    HHHHHHHHHHTTB      HHHHH---HHHHHS  HHHHHHHHHHHT-T  TT  BTTBSS   S  HHH:    
ExpBur          :eeebbbbbbbbbbbbbeeebeebeeeeebeeeebbeebeeeebbebeeeebbee---bbeeeebebebbbebbbebe-eebeeeebeeeeebbbebbbee:    

queryA      3559:VVRQ:3562
                :*  *:
6vh2_A_1     303:VNMQ: 306
SecStr          :HHHH:    
ExpBur          :bbeb:    


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