#WARNING:no index is registered index 'YP_009725295.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 6xhn_B_1_E_1

Protein Model on 6xhn_B_1_E_1 (TEMPLATE: 6xhn )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) B 1 (B) polymer(polypeptide(L)) [300 aa] 3C-like proteinase :R1A_CVHSA
2 b E 1 (B) non-polymer(V3D) (3S)-3-{[N-(4-methoxy-1H-indole-2-carbonyl)-L-leucyl]amino}-2-oxo-4-[(3S)-2-oxopyrrolidin-3-yl]butyl 2-cyanobenzoate 3304H 3312M 3403F 3404L 3405N 3406G 3407S 3408C 3426H 3427H 3428M 3429E 3431P 3435H 3451R 3452Q 3453T 3454A (identity: 100.0 %/95.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6xhn_B_1 identity=95.4%
queryA      3266:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYK:3365
                :******************************** ********** ****************** ******************** * ***** ********:
6xhn_B_1       4:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK: 103
SecStr          :        HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  TTT SS  HHHHHHT  GGG EEEETTEEE EEEEEEETTEEEEEESS  TT  EEE:    
ExpBur          :eeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebbeeeeebebebeeeeebbbebebeeebeebbeee:    
Contact         :                                      b       b                                                     

queryA      3366:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITV:3465
                :******************************* ********************************************* ********************* :
6xhn_B_1     104:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL: 203
SecStr          :E    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SSSS        B HH:    
ExpBur          :eeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebebbb:    
Contact         :                                     bbbbbb                 bbbb b   b               bbbb           

queryA      3466:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSG:3565
                :**************************************************************** *********  ******  ****************:
6xhn_B_1     204:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMXXRTILGSTILEDEFTPFDVVRQCSG: 303
SecStr          :HHHHHHHHHHHTT  TT  S    HHHHHHHHHHTTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHH  --  BTTBSS   S  HHHHHHHHT :    
ExpBur          :bbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeebbeebeebbeeeeeebeebbbbbbebbeeee--eebeeeeeeebbbbbebbeeeeee:    

queryA      3566:VT:3567
                :**:
6xhn_B_1     304:VT: 305
SecStr          :  :    
ExpBur          :ee:    


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