Protein Model on 5e6j_A_1_H_1 (TEMPLATE: 5e6j )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(R1A_SARS2) A 1 (A) polymer(polypeptide(L)) [317 aa] Replicase polyprotein 1ab :R1AB_CVHSA
2 b H 1 (A) non-polymer(NI) NICKEL (II) ION 1754T(H) 1882Y(H) (identity: 0.0 %/82.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5e6j_A_1 identity=82.0%
queryA      1566:RTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT:1665
                : ********** ***** ***************************  ****** *** ***** ******** * ***************** *** ***:
5e6j_A_1       4:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT: 103
SecStr          : EEEEEEESSSS  EEEEEESSS GGGTTSSEEETTEE SSS   GGGTT EEEE   SHHHHHHHHHHHS   TTHHHHHHHHHHHHTTS   B SSSB:    
ExpBur          :eebebebbbbeeeeeeeebeeeebbeeebeebbbeeeebbeeebeeebeeeebbbebeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebb:    

queryA      1666:SIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGV:1765
                :***********   ** *** * *** **** ******** *********** **************  * ***** * ********* ***  *** **:
5e6j_A_1     104:SIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV: 203
SecStr          :   S TTTHHHHHHHHHHHTS   BSSHHHHHHHHHHHHT  HHHHHHHHHHTT  TT    HHHHHHHHHTTB  TT EEEEEEE SSS EEEEEEEGG:    
ExpBur          :bbeeeeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbbbbbbbbbbbebeeeeeeebeebbeebbebbebeebebbbbeebeeeeeeeeeeeeb:    
Contact         :                                                                                        b           

queryA      1766:EAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITD:1865
                :***********   * ** *** **  ** ******* ********* * *  *** ** *********** *** ***** **** *** ****** **:
5e6j_A_1     204:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD: 303
SecStr          :GGSEEES S SHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE GGG SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEES EEEEEEE:    
ExpBur          :ebbbbeebbbbeebeeeeeeeeeeebebebbbeebebebbbbbbeeeeeebeeeebbbbbbbeeeeeebebbbbbbeeebbebebeeeeeeeebebbbbb:    

queryA      1866:VFYKENSYTTTIKPVTY:1882
                :***** ********   :
5e6j_A_1     304:VFYKETSYTTTIKPLEH: 320
SecStr          :EEEE S B         :    
ExpBur          :bbbebeebeeeeeeeee:    
Contact         :                b                                                                                   


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