Protein Model on 5eu8_A_2_C_2 (TEMPLATE: 5eu8 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(R1A_SARS2) A 2 (A) polymer(polypeptide(L)) [300 aa] main protease :V9PIT1_9ALPC
2 b C 2 (A) non-polymer(ZN) ZINC ION 3304H 3427H 3450D (identity: 100.0 %/44.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5eu8_A_2 identity=44.7%
queryA      3263:QSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTP:3362
                : ** **** *** ** * * *  *   ****** * * ******         ***  *     ***     *  * *         * ***   ** **:
5eu8_A_2       5:SSGLRKMAQPSGVVEPCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRV-INYENELSSVRLHNFSIAKNNAFLGVVSAKYKGVNLVLKVNQVNPNTP: 103
SecStr          :           TTTGGGEEEEEETTEEEEEEEETTEEEEEGGGS S SSS -  HHHHHHT  GGGEEEEETTEEE EEE  EETTEEEEEESS  TT  :    
ExpBur          :eeebeeeeeebeebeebbbebbbeeebbbbbbbeeebbbbbbbbbeeeeee-bebeebeeeeeeeebebebeeeebebeeeebeebbbbbebeeebeeeb:    
Contact         :                                         b                                                          

queryA      3363:KYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTT:3462
                :  **    **  *  **** * *  **   **   ******  * *****         * **** **  * * *  ***  **   *    *  **   :
5eu8_A_2     104:EHKFKSVRPGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGTLYFVYMHHLELGNGSHVGSNLEGEMYGGYEDQPSMQLEGTNVM: 203
SecStr          :  EE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE SSS BGGG  SSSS        B:    
ExpBur          :eeeeeebeebebbbbbbbeebeeeeeebbbbbeebbbeeebeebbebbbbbbeeeeebbbbbbbbeebeeebbbbbbbebebbeebebbeeeeebeeeee:    
Contact         :                                                                b                      b            

queryA      3463:ITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQ:3562
                :   ** * **** *** ***      **   *  *             *    * * **  *          *  *  *****    * *****  * **:
5eu8_A_2     204:SSDNVVAFLYAALINGERWFVTNTSMTLESYNAWAKTNSFTEIVS--TDAFNMLAAKTGYSVEKLLECIVR-LNKGFGGRTILSYGSLCDEFTPTEVIRQ: 300
SecStr          : HHHHHHHHHHHHHHT  TT  S    HHHHHHHHHTTTB     --SGGGHHHHHHHS  HHHHHHHHHH-HTT  TT  BTTBSS      HHHHHHH:    
ExpBur          :bbebbbbbbbbbbeeebeebebeeebebeebbebbeeeebeebee--eeebeebbeebeeebeebbbbbbe-beeebeeeebbeeeebbbbbbbebbeee:    

queryA      3563:CSGV:3566
                :  **:
5eu8_A_2     301:MYGV: 304
SecStr          :HT  :    
ExpBur          :beee:    


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