Protein Model on 1q2w_A_1_C_1 (TEMPLATE: 1q2w )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(YP_009725295.1) A 1 (A) polymer(polypeptide(L)) [295 aa] 3C-like protease :R1A_CVHSA
2 b C 1 (A) non-polymer(MPD) (4S)-2-METHYL-2,4-PENTANEDIOL 3371P 3463I 3465V(L) 3503E 3509H (identity: 80.0 %/95.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1q2w_A_1 identity=95.0%
queryA      3266:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYK:3365
                :******************************** *********    **************** ******************** * ***** ********:
1q2w_A_1       5:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICXXXXMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK: 104
SecStr          :        HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG ----  S  HHHHHHT  GGG EEEETTEEE EEEEEEETTEEEEEESS  TT  SEE:    
ExpBur          :eeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbebbe----eeebebeeebeeeeeeebebebeeeebebeeeeeeebbbebebeeebeebbeee:    

queryA      3366:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITV:3465
                :******************************* ********************************************* ********************* :
1q2w_A_1     105:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL: 204
SecStr          :E    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SS  S       B HH:    
ExpBur          :eeebeebebbbbbbbeebeeeeeebbbbbebebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebebbb:    
Contact         :     b                                                                                           b b

queryA      3466:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCS:3564
                :**************************************************************** *****************  ***************:
1q2w_A_1     205:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCS: 303
SecStr          :HHHHHHHHHHHTT  TT  S    HHHHHHHHGGGTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHH  TT  BTTBSS      HHHHHHH  :    
ExpBur          :bbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeeebeebeebbeebebebeebbbbbbebbeeebeeeebeeeeebbbbbbbebbeeebe:    
Contact         :                                     b     b                                                        


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