#WARNING:no index is registered index 'YP_009725295.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 3iwm_A_2_E_2

Protein Model on 3iwm_A_2_E_2 (TEMPLATE: 3iwm )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 2 (A) polymer(polypeptide(L)) [301 aa] 3C-like proteinase :R1A_CVHSA
2 b E 2 (H) polymer(polypeptide(L)) [6 aa] N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE 3287T 3288T 3289T 3290L 3304H 3403F 3404L 3405N 3406G 3408C 3426H 3427H 3428M 3429E 3430L 3431P 3450D 3451R 3452Q 3453T 3454A 3455Q (identity: 100.0 %/96.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3iwm_A_2 identity=96.0%
queryA      3264:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK:3363
                :********************************** ********** ****************** ******************** * ***** ******:
3iwm_A_2       1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK: 100
SecStr          :         THHHHTTEEEEESSS EEEEEEETTEEEEEGGGS  TTTTTS  HHHHHTT  TTS  BBSSS  B   B  EETTEE  B SS  TT  S:    
ExpBur          :eeeeeeeeeeeebeebbbebbbeeeebbbbbbeebbbbbbebbbeeebeeebebeebbeeeeeeebebbbeeeebebebeeebebbbebebeeebeebee:    
Contact         :                       bbbb             b                                                           

queryA      3364:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI:3463
                :********************************* ********************************************* ********************:
3iwm_A_2     101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI: 200
SecStr          :EE     TT EEEEEEEETTEEEEEEEEEB TTS B     SS TT EEEEEETTEEEEEEEE    TTS B EE TTS BSSS  SSSS          :    
ExpBur          :eebeebeebeebbbbbbeebeeeeeebbbbbebebbeeebeeebbbbbbbbeeeebbbbbbbbbbebeeebbbbbbbebebbeebebbeeebeeeeeeeb:    
Contact         :                                       bbbb b                 bbbbbb                  bbbbbb        

queryA      3464:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC:3563
                :* **************************************************************** *****************  **************:
3iwm_A_2     201:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 300
SecStr          :SHHHHHHHHHHHHTT  TTTS     HHHHHHHHHHTT     HHHHHHHHHHHHHTS  HHHHHHHHTTHHHH  TT  BTTBSS      HHHHHHT :    
ExpBur          :eeeeeeeeebbeeeeeeeeeeeeebeeeebeebbeeeeeeebeeeebeeeeeebeeeeeebeeebbeebeebeeebeeeeeeebeeeeeeeeeeeeeeee:    

queryA      3564:S:3564
                :*:
3iwm_A_2     301:S: 301
SecStr          : :    
ExpBur          :e:    


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