#WARNING:no index is registered index 'YP_009725295.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 4wmf_C_1_N_1

Protein Model on 4wmf_C_1_N_1 (TEMPLATE: 4wmf )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) C 1 (C) polymer(polypeptide(L)) [289 aa] MERS-CoV 3CL protease :W6A941_9BETC
2 b N 1 (C) non-polymer(PG4) TETRAETHYLENE GLYCOL 3298V(T) 3300Y(W) 3346Q 3351K (identity: 50.0 %/51.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4wmf_C_1 identity=51.0%
queryA      3274:GKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQ---AGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQ:3370
                :* ** ********  ********  * ***** *       ***  ***   ** * **        *** ** **   *** ** *** ** * *    :
4wmf_C_1      11:GDVEACMVQVTCGSMTLNGLWLDNTVWCPRHVMCPADXXXDPNYDALLISMTNHSFSVQKHIGAPANLRVVGHAMQGTLLKLTVDVANPSTPAYTFTTVK: 110
SecStr          : TTGGGEEEEEETTEEEEEEEETTEEEEEGGGGS   ---   HHHHHHT  GGGEEEEE SSS EEE EEEEEEETTEEEEEESS  TT  SEEE    :    
ExpBur          :eebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeee---ebebeebeeebeeeebebebbeeeeeebebeeeeeeebbbebebeeebeebbeeeeeebe:    
Contact         :                        b b                                                b    b                   

queryA      3371:PGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAW:3470
                :**  ********* * *     **** ******* ** ****         ***** ***  * * *    *  ** * * *      **    *** **:
4wmf_C_1     111:PGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSAGSVGYTKEGSVINFCYMHQMELAXGTHTGSAFDGTMYGAFMDKQVXXXQLTDKYCSVNVVAW: 210
SecStr          :TT EEEEEEEETTEEEEEEEEEB TTS EE    TT TT EEEEEETTEEEEEEEEEEE  - EEEEE TTS BGGG   S  ---    SB HHHHHHH:    
ExpBur          :eeeebebbbbbebeebbebebebeeeebbebbbbeebbbbbbbeeeeeebebbbbbbbeee-ebbbbbbbebebbeeeebbee---eeeeebebbbbbbb:    

queryA      3471:LYAAVINGDRWFLNRFTTTLNDFNLVAMKYNY-EPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ:3569
                :****  **  **     *    **  *      *      **    *   ** *          *   *  *  ****  ******* **  *  **  *:
4wmf_C_1     211:LYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGTQSVDM---LAVKTGVAIEQLLYAIQQLY-TGFQGKQILGSTMLEDEFTPEDVNMQIMGVVMQ: 306
SecStr          :HHHHHHHT  TT  S    HHHHHHHHHTTTB      HHHHH---HHHHHT  HHHHHHHHHHHT-T  TT  BTTBSS      HHHHHHHHHT    :    
ExpBur          :bbbbbeeebeebeeeeebeeeebbeebeeebbeebeeeebbee---bbeebebbbebbbebbbebb-ebbeeeebeebbbbbeeeebeebbeeeeeeeee:    


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