Protein Model on 4zuh_A_1_C_1 (TEMPLATE: 4zuh )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(YP_009725295.1) A 1 (A) polymer(polypeptide(L)) [298 aa] PEDV 3C-Like protease :K4L9I6_9ALPC
2 b C 1 (C) polymer(polypeptide(L)) [8 aa] peptide substrate SAVLQSGF 3287T(N) 3288T(M) 3289T(A) 3290L 3304H 3310E(T) 3403F 3404L(I) 3405N 3406G 3407S(A) 3408C(A) 3426H 3427H(Q) 3428M(L) 3429E 3435H 3450D 3451R(Q) 3452Q(P) 3453T 3454A(L) 3455Q (identity: 47.8 %/45.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4zuh_A_1 identity=45.1%
queryA      3264:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSE-DMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTP:3362
                : * **** *** ** * * *  *   ****** * * ******  *        *     *   ***    *** * * *  *    *  **   *  **:
4zuh_A_1       1:AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTSTIDYDYALSVLRL--HNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTP:  98
SecStr          :          HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG S SSS   HHHHHHT  G--GGEEEEETTEEE EEEEEEETTEEEEEESS  TT  :    
ExpBur          :eebebeeeebeebeebbbebbbeeeebbbbbbeebbbbbbebbbeeeeeebebeebbeebee--eebebbeeeeebebeebeeeebbbebebeeebeeeb:    
Contact         :                       bbbb             b     b                                                     

queryA      3363:KYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTT:3462
                :**      **  *  **** *   ***   ** * ** *** **  ** * **    * *** *  **  * * * ** *  **   *  * *  *    :
4zuh_A_1      99:KYTYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGAAGSPGYNINNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSL: 198
SecStr          :SEEE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BGGG  SSSS        B:    
ExpBur          :eeeeeebeebebbbbbbbeebeeeeeebbbbbebebbeeebeeebbbbbbbbeeeebbbbbbbbbbebeeebbbbbbbebebbeebebbeeeeeeeeeee:    
Contact         :                                        bbbbbb                 bbbb     b              bbbbbb       

queryA      3463:ITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQ:3562
                : * **** **** ***  * *         **  *             *    * * **  *    **   *  *   *  ***   * ****   * **:
4zuh_A_1     199:FTENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVV--NTDCFSILAAKTGVDVQRLLASIQSLHKN-FGGKQILGYTSLTDEFTTGEVIRQ: 295
SecStr          : HHHHHHHHHHHHHTT  TT  S    HHHHHHHHTTTTB    --  GGGHHHHHHHS  HHHHHHHHHHHHH - TT  BTTBSS      HHHHHHH:    
ExpBur          :bbebbbbbbbbbbeeebeebebeeebebeebbeebeeeebeebe--eeeebeebeeeeebebeebbbbbeebeee-beeeebeeeeebbbbbbbebbeee:    

queryA      3563:CSG:3565
                :  *:
4zuh_A_1     296:MYG: 298
SecStr          :HH :    
ExpBur          :bee:    


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