Protein Model on 5c5o_B_1_D_1
(TEMPLATE: 
5c5o
)Protein Model on 5c5o_B_1_D_1
(TEMPLATE: 5c5o
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [300 aa] | 3C-like proteinase :R1AB_CVHSA | |
| 2 | b | D 1 (B) | non-polymer(SDJ) | (2S)-3-(1H-imidazol-5-yl)-2-({[(3S,4aR,8aS)-2-(N-phenyl-beta-alanyl)decahydroisoquinolin-3-yl]methyl}amino)propanal | 3288T 3304H 3307C 3308T 3309S(A) 3312M 3403F 3404L 3405N 3406G 3407S 3408C 3426H 3427H 3429E 3450D 3451R(I) 3452Q (identity: 88.9 %/95.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5c5o_B_1 identity=95.7% |
queryA 3264:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK:3363
:********************************** ********** ****************** ******************** * ***** ******:
5c5o_B_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG HHHHHS HHHHHHT GGG EEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eeeeeeeeebeebeebbbebbbeeeebbbbbbeebbbbbbebbbeeeeeeebebeebbeeeeeeebebbbeeeebebeeeeeeebbbebebeeebeeebe:
Contact : b b bbb b
queryA 3364:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI:3463
:********************************* ********************************************* ******* ************:
5c5o_B_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDIQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEEB TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT SSSS B :
ExpBur :eeeeebeebebbbbbbbeebeeeeebbbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:
Contact : bbbbbb bb b bbb
queryA 3464:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC:3563
:* **************************************************************** ***************** **************:
5c5o_B_1 201:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS SS HHHHHHH :
ExpBur :bbbbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeeeeeebeebbeeeebebeebbbbbeebbeeebeeeebeeeeebebbbbbeebeebe:
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[assembly_id:2]
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