Protein Model on 5zqg_A_1_C_1 (TEMPLATE: 5zqg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(YP_009725295.1) A 1 (A) polymer(polypeptide(L)) [292 aa] Non-structural protein :R4JK63_9ALPC
2 b C 1 (C) polymer(polypeptide(L)) [7 aa] PEPTIDE LEU-ALA-GLN-LEU-GLN-VAL-ALA 3287T(N) 3288T(M) 3289T(A) 3290L 3304H 3403F 3404L(I) 3406G 3407S(A) 3408C(A) 3426H 3427H(Q) 3428M(L) 3429E 3435H 3450D 3451R(Q) 3452Q(P) 3453T 3454A(L) 3455Q (identity: 47.6 %/44.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5zqg_A_1 identity=44.8%
queryA      3264:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDM-LNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTP:3362
                : * **** *** ** * * *  *   ****** * * ******           *     *   ***    *** * * *  *    *  **   *  **:
5zqg_A_1       2:AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIAXXXXXXIDYDYALSVLRL--HNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTP:  99
SecStr          :          HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG ------  HHHHHHT  G--GGEEEEETTEEE EEEEEEETTEEEEEESS  TT  :    
ExpBur          :eebebeeeebeebeebbbebbbeeeebbbbbbeebbbbbbebbe------eebeebeeebee--eebebbeeeeebeeeebebeebbbebebeeebeeeb:    
Contact         :                       bbbb             b                                                           

queryA      3363:KYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTT:3462
                :**      **  *  **** *   ***   ** * ** *** **  ** * **    * *** *  **  * * * ** *  **   *  * *  *    :
5zqg_A_1     100:KYTYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGAAGSPGYNINNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSL: 199
SecStr          :SEEE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BGGG  SSSS        B:    
ExpBur          :eeeeeebeebebbbbbbbeebeeeeeebbbbeebebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeeee:    
Contact         :                                        bb bbb                 bbbb     b              bbbbbb       

queryA      3463:ITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQ:3562
                : * **** **** ***  * *         **  *             *    * * **  *    **   *  *   *  ***   * ****   * **:
5zqg_A_1     200:FTENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVV--NTDCFSILAAKTGVDVQRLLASIQSLHKN-FGGKQILGYTSLTDEFTTGEVIRQ: 296
SecStr          : HHHHHHHHHHHHHTT  TT  S    HHHHHHHHTTTTB    --  GGGHHHHHHHS  HHHHHHHHHHHHH - TT  BTTBSS      HHHHHHH:    
ExpBur          :bbebbbbbbbbbbeeebeebebeeebebeebbeebeeeebeebe--eeeebeebeeeeebebeebbbbbeebeee-beeeebeeeeebbbbbbbebbeee:    

queryA      3563:CSG:3565
                :  *:
5zqg_A_1     297:MYG: 299
SecStr          :HH :    
ExpBur          :bee:    


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