#WARNING:no index is registered index 'YP_009725295.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 6vgz_B_1_D_1

Protein Model on 6vgz_B_1_D_1 (TEMPLATE: 6vgz )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) B 1 (B) polymer(polypeptide(L)) [298 aa] Orf1a protein :A0A1L2E0X0_9BETC
2 b D 1 (B) non-polymer(QZG) N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-({[trans-4-(propan-2-yl)cyclohexyl]oxy}carbonyl)-L-leucinamide 3403F 3404L 3406G 3407S 3408C 3426H 3427H(Q) 3428M 3429E 3435H 3450D 3451R(K) 3452Q (identity: 84.6 %/52.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6vgz_B_1 identity=52.0%
queryA      3263:QSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQ---AGNVQLRVIGHSMQNCVLKLKVDTANP:3359
                : **  **  *** ** ********  ********  * ***** *       ***  ***   ** * **        *** ** **   *** ** ***:
6vgz_B_1       7:HSGLVKMSHPSGDVEACMVQVTCGSMTLNGLWLDNTVWCPRHVMCPADQLSDPNYDALLISMTNHSFSVQKHIXXXXNLRVVGHAMQGTLLKLTVDVANP: 106
SecStr          :           HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGGS GGGTTS  HHHHHHT  GGG EEE   ---- B EEEEEEETTEEEEEESS  T:    
ExpBur          :eeebeeeeeebeebeebbbbbbbeeeebbbbbbeebbbbbbebbbeeeebeebebeebbeebeeeebebbeee----ebebeeeeeeebbbebebeeebe:    

queryA      3360:KTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGT:3459
                : ** * *    **  ********* * *     **** ******* *******         ***** ***  * * *    *  ** * * *  *   *:
6vgz_B_1     107:STPAYTFTTVKPGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSCGSVGYTKEGSVINFCYMHQMELANGTHTGSAFDGTMYGAFMDKQVHQVQLT: 206
SecStr          :T   EEE    TT EEEEEEEETTEEEEEEEEE  TTS B S   TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BGGG  SSSS      :    
ExpBur          :eebeeeeeebeebebbbbbbbbebbeeeeebbbbbebebbeeebeeebbbbbbbeeeeeebbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeee:    
Contact         :                                           bb bbb                 bbbb     b              bbb       

queryA      3460:DTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNY-EPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFD:3558
                :*    *** ******  **  **     *    **  *      *      **    *   ** *          *   *  *  ****  ******* *:
6vgz_B_1     207:DKYCSVNVVAWLYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGTQSVDM---LAVKTGVAIEQLLYAIQQLY-TGFQGKQILGSTMLEDEFTPED: 302
SecStr          :  B HHHHHHHHHHHHHTT  TT  S    HHHHHHHHHTTTB      HHHHH---HHHHH   HHHHHHHHHHHT-T  TT  BTTBSS   S  HHH:    
ExpBur          :eeebbbbbbbbbbbbbeeebeebeeeeebeeeebbeebeeeebbebeeeebbee---bbeeeebbbebbbebbbebe-eebeeeebeeeeebebebbbee:    

queryA      3559:VVRQ:3562
                :*  *:
6vgz_B_1     303:VNMQ: 306
SecStr          :HHHH:    
ExpBur          :beeb:    


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