#WARNING:no index is registered index 'YP_009725301.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 5gwz_A_1_B_1

Protein Model on 5gwz_A_1_B_1 (TEMPLATE: 5gwz )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (B) polymer(polypeptide(L)) [299 aa] PEDV main protease :R1A_PEDV7
2 b B 1 (A) polymer(polypeptide(L)) [299 aa] PEDV main protease :R1A_PEDV7 4R 6M 7A 9P 10S 11G 14E 122P(A) 123S(A) 124G 125V 126Y 127Q(G) 128C(V) 137K(R) 138G 139S 141L(I) 280T(Q) 285A(T) 299Q 300C(M) 301S(Y) 302G (identity: 58.3 %/46.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5gwz_A_1 identity=46.1%
queryA         2:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSE-DMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
                :* **** *** ** * * *  *   ****** * * ******  *        *     *   ***    *** * *    *    *  **   *  ***:
5gwz_A_1       7:GLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDIVMCPRHVIASSTTSTIDYDYALSVLRL--HNFSISSGNVFLGVVSATMRGALLQIKVNQNNVHTPK: 104
SecStr          :         HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG   SSS   HHHHHHH  G--GGEEEEETTEEE EEEEEEETTEEEEEESS  TT  S:    
ExpBur          :ebebeeeebeebeebbbebbbeeeebbbbbbeebbbbbbbbbbeeeeeebebeebeeebee--eebebbeeeeebeeeebeeeebbbebebeeebeeebe:    
Contact         :  b bb bbb  b                                                                                       

queryA       101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
                :*      **  *  **** *   ***   ** * ** *** ** *** * **    * *** *  **  * * * ** *  **   *  * *  *     :
5gwz_A_1     105:YTYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYNINNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLF: 204
SecStr          :EEE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BGGG  SSSS        B :    
ExpBur          :eeeeebebbebbbbbbbeebeeeeeebbbbbebebbeeebeeebbbbbbbeeeeebbbbbbbbbbebeeebbbbbbbebebbeebebbeeebeeeeeeeb:    
Contact         :                     bbbbbbb        bbb b                                                           

queryA       201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
                :* **** **** ***  * *         **  *        *    *    * * **  *    **   *  *   *  ***   * ****   **** :
5gwz_A_1     205:TENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMT--TVGNTDCFSILAAKTGVDVQRLLASIQSLHKN-FGGKQILGHTSLTDEFTTGEVVRQM: 301
SecStr          :HHHHHHHHHHHHHTT  TT  S    HHHHHHHHTTTTB --     GGGHHHHHHHT  HHHHHHHHHHHTT -  S  BTTBSS      HHHHHHHH:    
ExpBur          :bebbbbbbbbbbeeebeebeeeeeeebeebbeebeeeebb--ebeeeeebeebeeeeebbbeebbbbbeebbee-beeeebeeeeebbbebbbebbbeee:    
Contact         :                                                                               b    b             bb

queryA       301:SGV: 303
                : **:
5gwz_A_1     302:YGV: 304
SecStr          :H  :    
ExpBur          :eee:    
Contact         :bb                                                                                                  


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