#WARNING:no index is registered index 'YP_009725301.1' in 'http://www.uniprot.org/uniprot/' Protein Model on 6vh2_A_1_C_1

Protein Model on 6vh2_A_1_C_1 (TEMPLATE: 6vh2 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [299 aa] Orf1a protein :A0A1L2E0X0_9BETC
2 b C 1 (A) non-polymer(QZ4) 4,4-difluorocyclohexyl [(2S)-3-cyclohexyl-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-1-oxopropan-2-yl]carbamate 41H 49M(L) 54Y 140F 141L 142N(C) 143G 144S 145C 163H 164H(Q) 165M 166E 172H 187D 188R(K) 189Q 190T(V) 191A(H) 192Q (identity: 70.0 %/52.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6vh2_A_1 identity=52.2%
queryA         1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQ---AGNVQLRVIGHSMQNCVLKLKVDTANPK:  97
                :**  **  *** ** ********  ********  * ***** *       ***  ***   ** * **        *** ** **   *** ** *** :
6vh2_A_1       8:SGLVKMSHPSGDVEACMVQVTCGSMTLNGLWLDNTVWCPRHVMCPADQLSDPNYDALLISMTNHSFSVQKHIXXXANLRVVGHAMQGTLLKLTVDVANPS: 107
SecStr          :          HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  STT SS  HHHHHHT  GGGEEEE   --- EE EEEEEEETTEEEEEESS  TT:    
ExpBur          :eebeeeeeebeebeebbbbbbbeebebbbbbbeeebbbbbebbbeeeeeeebebeebbeebeeeebebeeee---eebbbebeeeeebbbbbebeeebee:    
Contact         :                                        b       b    b                                              

queryA        98:TPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTD: 197
                :** * *    **  ********* * *     **** ******* *******         ***** ***  * * *    *  ** * * *  *   **:
6vh2_A_1     108:TPAYTFTTVKPGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSCGSVGYTKEGSVINFCYMHQMELANGTHTGSAFDGTMYGAFMDKQVHQVQLTD: 207
SecStr          :   EEE    TT EEEEEEEETTEEEEEEEEE  TTS B S   TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BGGG  SSSS       :    
ExpBur          :ebeeeeeebeebeebbbbbbbebbeeeeeebbbbbbebbeeebeeebbbbbbbbeeeeebbbbbbbbbebeeebbbbbbbebebbeebebeeeebebeee:    
Contact         :                                          bbbbbb                 bbbb     b              bbbbbb     

queryA       198:TTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNY-EPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDV: 296
                :    *** ******  **  **     *    **  *      *      **    *   ** *          *   *  *  ****  ******* **:
6vh2_A_1     208:KYCSVNVVAWLYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGTQSVDM---LAVKTGVAIEQLLYAIQQLY-TGFQGKQILGSTMLEDEFTPEDV: 303
SecStr          : B HHHHHHHHHHHHHTT  TT  S    HHHHHHHHHHTTB      HHHHH---HHHHHS  HHHHHHHHHHHT-T  TT  BTTBSS   S  HHHH:    
ExpBur          :eebbbbbbbbbbbbbeeebeebeeeeebeeeebbeebeeeebbebeeeebbee---bbeeeebebebbbebbbebe-eebeeeebeeeeebbbebbbeeb:    

queryA       297:VRQ: 299
                :  *:
6vh2_A_1     304:NMQ: 306
SecStr          :HHH:    
ExpBur          :beb:    


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