Protein Model on 1f42_A_1_D_1 (TEMPLATE: 1f42 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IL6RA_HUMAN) A 1 (A) polymer(polypeptide(L)) [297 aa] INTERLEUKIN-12 BETA CHAIN :I12B_HUMAN
2 b D 1 (A) non-polymer(MNB) 5-MERCAPTO-2-NITRO-BENZOIC ACID 254E(C) 256R(Q) 268W(R) 293R 303W 306W (identity: 50.0 %/27.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1f42_A_1 identity=27.8%
queryA        39:PGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAG--------------TVHLLVD--VPPEEPQLSCF: 122
                :**  * ***    **      * *         *   * *  *        * * * *   *                      * *   *     * * :
1f42_A_1      20:PGEMVVLTCDT--PEEDG-ITWTL------DQSSEVLGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCE: 110
SecStr          :  EEEEEE S --S  SS- EEEE------TT     EESSEEEEEE SGGG EEEEEEETTEEEEEEEEEEEEEETTEE   SB    TTTSS   EEE:    
ExpBur          :eeeebebebeb--eeeee-bebbb------eeeeeeeeeeeebebebeeeeebbebbbbeeeeeebebebbbbbeeeeeebeebbeebeeeeeebbbebe:    

queryA       123:RKSPLSNVVCEW----------------GPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQ: 206
                : *       * *                *       *  *  *                 ** * *  *   * *    *  *  *  *         * :
1f42_A_1     111:AKNYSGRFTCWWLTTISTDLTFSVKSSRGXXXXXGVTCGAATLSAERVRGDNKEY----EYSVECQEDS---ACPAAEESLPIEVMVDAVHKLKYENYTS: 203
SecStr          :BSSSSSEEEEEEEES  SSEEEEEEEEE ----- EEE   EEEEEEEETTEEEE----EEEEEEEETT---  TTS   S EEEEEEEEETTEEEEEEE:    
ExpBur          :bebbebebebebbbebeeebebebebeee-----ebebeeeeeeeeeeeeeeebb----bbebebebee---eeeeeebeeebebebebbeeebbbebee:    

queryA       207:TFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNS--SFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWS: 304
                : *    *  **** *        * *   * *  *  *    *   * *                  *     **             ***       **:
1f42_A_1     204:SFFIRDIIKPDPPKNLQLKPL-KNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKRXXXXRVFTDKTSATVICRK----NASISVRAQDRYYSSSWS: 298
SecStr          :EE HHHHB     EEEEEEE -TT SEEEEEEE  TTS S TTTS EEEEEEEE S   ---- EEESSSEEEEE  T----T EEEEEEEETTS     :    
ExpBur          :ebebeebbbbeebeebeeeee-eeeeebebebebbeebbeeeeebbbbbbbeeeeeeee----eeebeeeebebebee----ebebbbebbbeeeebeeb:    
Contact         :                                                 b b           b                        b         b 

queryA       305:EWS: 307
                :** :
1f42_A_1     299:EWA: 301
SecStr          :  E:    
ExpBur          :eeb:    
Contact         : b                                                                                                  


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